Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 RNA5SP435-201ENST00000364044 108 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 AL158827.1-201ENST00000416300 391 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AC013268.2-201ENST00000420753 337 ntBASIC5.71□□□□□ -1.5
CDH3P22223 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 HMGN2P27-201ENST00000427352 270 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 KRT8P51-201ENST00000438938 274 ntBASIC5.71□□□□□ -1.5
CDH3P22223 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 SDC4P-201ENST00000453285 601 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.71□□□□□ -1.5
CDH3P22223 AC147055.1-201ENST00000509261 750 ntBASIC5.71□□□□□ -1.5
CDH3P22223 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH3P22223 RNU4-18P-201ENST00000516751 149 ntBASIC5.71□□□□□ -1.5
CDH3P22223 RN7SKP5-201ENST00000517045 272 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH3P22223 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.71□□□□□ -1.5
CDH3P22223 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 OR4A42P-201ENST00000531397 938 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AC006530.1-201ENST00000555980 571 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 AC027216.1-201ENST00000577726 685 ntBASIC5.71□□□□□ -1.5
CDH3P22223 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.71□□□□□ -1.5
CDH3P22223 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 AC008691.1-209ENST00000642094 814 ntBASIC5.71□□□□□ -1.5
CDH3P22223 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
CDH3P22223 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 AL034546.1-201ENST00000623740 3693 ntBASIC5.71□□□□□ -1.5
CDH3P22223 THAP12P9-201ENST00000503971 2360 ntBASIC5.71□□□□□ -1.5
CDH3P22223 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.71□□□□□ -1.5
CDH3P22223 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
CDH3P22223 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 MRRFP1-201ENST00000435941 1675 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AL353796.1-201ENST00000561542 3241 ntBASIC5.7□□□□□ -1.5
CDH3P22223 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 RN7SKP69-201ENST00000365390 305 ntBASIC5.7□□□□□ -1.5
CDH3P22223 RNA5SP284-201ENST00000384547 118 ntBASIC5.7□□□□□ -1.5
CDH3P22223 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH3P22223 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 AC245060.4-201ENST00000413293 1121 ntBASIC5.7□□□□□ -1.5
CDH3P22223 EEF1B2P8-201ENST00000414101 671 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC113412.1-201ENST00000425840 504 ntBASIC5.7□□□□□ -1.5
CDH3P22223 RPL23AP19-201ENST00000436229 369 ntBASIC5.7□□□□□ -1.5
CDH3P22223 CUBNP2-201ENST00000443534 1139 ntBASIC5.7□□□□□ -1.5
CDH3P22223 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 RPL31P15-201ENST00000449770 338 ntBASIC5.7□□□□□ -1.5
CDH3P22223 NPM1P19-201ENST00000450070 712 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AL162739.1-201ENST00000450606 307 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC007998.1-201ENST00000474156 672 ntBASIC5.7□□□□□ -1.5
CDH3P22223 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 AC099521.1-201ENST00000482557 334 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC104109.1-201ENST00000498563 436 ntBASIC5.7□□□□□ -1.5
CDH3P22223 PSMA2P2-201ENST00000504319 686 ntBASIC5.7□□□□□ -1.5
CDH3P22223 CCNHP1-201ENST00000513311 678 ntBASIC5.7□□□□□ -1.5
CDH3P22223 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH3P22223 AC022826.1-201ENST00000519383 805 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC026616.1-201ENST00000523157 525 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 AP000648.1-201ENST00000529682 397 ntBASIC5.7□□□□□ -1.5
CDH3P22223 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH3P22223 AL356801.1-201ENST00000559320 294 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
CDH3P22223 AP000919.1-201ENST00000582850 985 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH3P22223 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.7□□□□□ -1.5
CDH3P22223 AC006363.1-201ENST00000603806 463 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AL031601.1-201ENST00000605702 394 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AC138473.1-201ENST00000605717 526 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AL139099.4-201ENST00000614802 114 ntBASIC5.7□□□□□ -1.5
CDH3P22223 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 AL355480.1-201ENST00000629041 99 ntBASIC5.7□□□□□ -1.5
CDH3P22223 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 AC112255.1-201ENST00000624070 2493 ntBASIC5.7□□□□□ -1.5
CDH3P22223 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.7□□□□□ -1.5
CDH3P22223 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.7□□□□□ -1.5
CDH3P22223 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDH3P22223 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDH3P22223 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CDH3P22223 HSPA8P14-201ENST00000552265 1805 ntBASIC5.69□□□□□ -1.5
CDH3P22223 AC245100.2-201ENST00000454544 1679 ntBASIC5.69□□□□□ -1.5
CDH3P22223 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms