Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.67□□□□□ -1.5
HMGA1P17096 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 RPSAP73-201ENST00000614820 330 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.67□□□□□ -1.5
HMGA1P17096 AC090527.3-201ENST00000619041 548 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 CYP4F35P-202ENST00000636121 390 ntBASIC5.67□□□□□ -1.5
HMGA1P17096 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
HMGA1P17096 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
HMGA1P17096 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
HMGA1P17096 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGA1P17096 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 AC104964.3-201ENST00000606115 2860 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AC006206.1-201ENST00000544842 3387 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGA1P17096 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 RNA5SP507-201ENST00000363603 121 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 U3.10-201ENST00000364459 214 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 RNU1-43P-201ENST00000365052 165 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 MIR765-201ENST00000390226 114 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGA1P17096 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGA1P17096 DUTP5-201ENST00000406790 469 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 RNA5SP487-201ENST00000410186 122 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.66□□□□□ -1.5
HMGA1P17096 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGA1P17096 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 AL451063.1-201ENST00000450164 1133 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGA1P17096 AL389915.2-201ENST00000454576 441 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AC004453.1-201ENST00000487895 408 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AC109464.1-201ENST00000511091 819 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 HMGN2P6-201ENST00000551091 273 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGA1P17096 AP000769.2-201ENST00000602344 396 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AL121612.2-201ENST00000612261 482 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC5.66□□□□□ -1.5
HMGA1P17096 AC118658.2-201ENST00000618697 459 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.66□□□□□ -1.5
HMGA1P17096 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.66□□□□□ -1.5
HMGA1P17096 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGA1P17096 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
HMGA1P17096 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
HMGA1P17096 KYNUP3-201ENST00000574386 1341 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AL353796.1-201ENST00000561542 3241 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
HMGA1P17096 MAPK10-270ENST00000641102 3538 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 AP004289.1-201ENST00000436307 2205 ntBASIC5.66□□□□□ -1.5
HMGA1P17096 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
HMGA1P17096 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
HMGA1P17096 AL022323.4-201ENST00000623980 13120 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC020656.2-201ENST00000613291 5309 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.65□□□□□ -1.5
HMGA1P17096 AL139805.2-201ENST00000455305 2433 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC007342.5-201ENST00000571340 2142 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGA1P17096 RNU1-106P-201ENST00000384382 164 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGA1P17096 IGBP1P3-201ENST00000447449 1000 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 RPS23P9-201ENST00000448848 438 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 RN7SL610P-201ENST00000463845 291 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 RN7SL329P-201ENST00000467740 299 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGA1P17096 SNRPCP2-201ENST00000504370 475 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.65□□□□□ -1.5
HMGA1P17096 AC021106.1-201ENST00000509020 1058 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC022832.1-201ENST00000530718 645 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.65□□□□□ -1.5
HMGA1P17096 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.65□□□□□ -1.5
HMGA1P17096 AC005341.1-201ENST00000571086 708 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 MIR3691-201ENST00000578066 90 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC074101.1-201ENST00000637861 241 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 AC073869.8-201ENST00000641806 335 ntBASIC5.65□□□□□ -1.5
HMGA1P17096 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
HMGA1P17096 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGA1P17096 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.65□□□□□ -1.51
HMGA1P17096 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
HMGA1P17096 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
HMGA1P17096 AC006600.2-201ENST00000624834 2506 ntBASIC5.65□□□□□ -1.51
HMGA1P17096 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
HMGA1P17096 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HMGA1P17096 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HMGA1P17096 AL078621.3-201ENST00000623707 2042 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms