Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AC094019.1-201ENST00000434678 472 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGB1P09429 CXCR2P1-202ENST00000443392 1074 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AC009963.4-201ENST00000448535 339 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 NPM1P17-201ENST00000479221 602 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 SNX18P24-201ENST00000505249 671 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
HMGB1P09429 RN7SKP248-201ENST00000516278 305 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 RNA5SP206-201ENST00000516703 121 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 SNORA76.2-201ENST00000517095 137 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGB1P09429 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
HMGB1P09429 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGB1P09429 AC025260.1-201ENST00000548858 430 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGB1P09429 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC7.36□□□□□ -1.23
HMGB1P09429 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC7.36□□□□□ -1.23
HMGB1P09429 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC7.36□□□□□ -1.23
HMGB1P09429 AC110743.1-201ENST00000584870 478 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGB1P09429 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.36□□□□□ -1.23
HMGB1P09429 AC006363.1-201ENST00000603806 463 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AC243654.2-201ENST00000612843 443 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 AL122023.1-201ENST00000622847 530 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.36□□□□□ -1.23
HMGB1P09429 AC018659.2-201ENST00000624690 715 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.36□□□□□ -1.23
HMGB1P09429 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 AC144833.1-201ENST00000567953 4089 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 AP001002.1-201ENST00000625148 1513 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC7.36□□□□□ -1.23
HMGB1P09429 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
HMGB1P09429 AC068769.1-201ENST00000474767 2426 ntBASIC7.36□□□□□ -1.23
HMGB1P09429 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 HSPD1P8-201ENST00000400121 1658 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC235565.1-201ENST00000456962 1325 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 RPL11P4-201ENST00000332269 436 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 RNA5SP346-201ENST00000363541 121 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 RNA5SP223-201ENST00000365174 120 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 AL034417.1-201ENST00000399343 800 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 AL121882.1-201ENST00000422893 417 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 RPL12P12-201ENST00000424633 501 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 RPL12P16-201ENST00000431098 498 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 GAPDHP23-201ENST00000444823 993 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
HMGB1P09429 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC239809.1-201ENST00000450470 217 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 HIGD1AP16-201ENST00000450986 258 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 NPM1P29-201ENST00000483112 803 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 RPL23AP73-201ENST00000492507 471 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 MTND3P24-201ENST00000506306 329 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 RNU6-1102P-201ENST00000516149 96 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 AP002812.4-201ENST00000532139 286 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 ZNF92P2-201ENST00000600543 1059 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AC012368.3-201ENST00000604190 219 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 NQO2-209ENST00000606474 470 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 AL591167.1-201ENST00000607321 456 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.35□□□□□ -1.23
HMGB1P09429 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC7.35□□□□□ -1.23
HMGB1P09429 AC007603.3-201ENST00000636915 979 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 AL355488.2-201ENST00000609909 2850 ntBASIC7.35□□□□□ -1.23
HMGB1P09429 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC7.35□□□□□ -1.23
HMGB1P09429 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.35□□□□□ -1.23
HMGB1P09429 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.34□□□□□ -1.23
HMGB1P09429 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC7.34□□□□□ -1.23
HMGB1P09429 AL121768.1-201ENST00000613917 2544 ntBASIC7.34□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms