Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 SNRPEP6-201ENST00000407465 277 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC007738.1-201ENST00000413892 348 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 RPL35AP3-201ENST00000414680 288 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL1P09341 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL1P09341 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 AC017019.1-201ENST00000426129 261 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.23□□□□□ -1.73
CXCL1P09341 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 HMGN1P32-201ENST00000441744 256 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AL031584.1-201ENST00000447169 754 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AZGP1P2-201ENST00000454506 345 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AL157777.1-201ENST00000468100 304 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL1P09341 AP000797.2-201ENST00000475768 606 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC099521.1-201ENST00000482557 334 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC015524.1-201ENST00000491585 472 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 RN7SL447P-201ENST00000494711 245 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL1P09341 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 OR5AM1P-201ENST00000532136 1032 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC027796.1-201ENST00000575593 512 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 MIR4701-201ENST00000583094 63 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 WBP1LP11-201ENST00000586141 328 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.23□□□□□ -1.73
CXCL1P09341 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AL136131.3-201ENST00000607600 188 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 AC073389.3-201ENST00000609434 935 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AL122023.1-201ENST00000622847 530 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 AC006387.1-201ENST00000626365 671 ntTSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
CXCL1P09341 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.23□□□□□ -1.73
CXCL1P09341 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 AL034370.1-201ENST00000397254 1590 ntBASIC4.23□□□□□ -1.73
CXCL1P09341 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CXCL1P09341 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.23□□□□□ -1.73
CXCL1P09341 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 OR4G1P-202ENST00000641173 1788 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 CASC19-204ENST00000641001 2055 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 AL080312.1-201ENST00000256654 824 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 RNA5SP77-201ENST00000365394 120 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 SNORD56.6-201ENST00000384569 71 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 MIR27A-201ENST00000385073 78 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 MIR130A-201ENST00000385274 89 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 RPA3-204ENST00000406109 434 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 RIMKLBP2-201ENST00000424737 654 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 RPL7P56-201ENST00000429441 717 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 AL031681.1-201ENST00000443304 400 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CXCL1P09341 IGBP1P3-201ENST00000447449 1000 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL1P09341 NXT1P1-201ENST00000458481 316 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL1P09341 RN7SL790P-201ENST00000474043 298 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 RPL12P30-201ENST00000488389 499 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL1P09341 SUMO2P4-201ENST00000504193 276 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 PRMT5P1-201ENST00000514351 598 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 TRIM51DP-201ENST00000529746 596 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC084121.1-201ENST00000533882 835 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL1P09341 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CXCL1P09341 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.22□□□□□ -1.73
CXCL1P09341 AC091078.2-201ENST00000557145 559 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC4.22□□□□□ -1.73
CXCL1P09341 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.22□□□□□ -1.73
CXCL1P09341 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.22□□□□□ -1.73
CXCL1P09341 AC022884.2-201ENST00000578535 580 ntBASIC4.22□□□□□ -1.73
CXCL1P09341 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms