Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SEPT7P3-201ENST00000455017 621 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 YRDCP3-201ENST00000456507 480 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC010307.1-201ENST00000467206 836 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 RN7SL456P-201ENST00000469290 295 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 RN7SL388P-201ENST00000498736 339 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC117522.1-201ENST00000509821 380 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 MTND6P19-201ENST00000519399 524 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC087276.1-201ENST00000529659 480 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AP006587.5-201ENST00000532033 739 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 FDPSP3-201ENST00000556903 1013 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC005070.2-201ENST00000604391 260 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC107214.2-201ENST00000608204 634 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 AC091834.1-201ENST00000614543 472 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC7.03□□□□□ -1.28
PDGFAP04085 AL157359.3-201ENST00000623771 217 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 CHD7-201ENST00000423902 11568 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 WDR7-202ENST00000357574 7213 ntTSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 FAM217B-201ENST00000358293 5152 ntAPPRIS P2 TSL 2 BASIC7.03□□□□□ -1.28
PDGFAP04085 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
PDGFAP04085 AC034111.1-201ENST00000562143 3770 ntBASIC7.03□□□□□ -1.28
PDGFAP04085 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.03□□□□□ -1.28
PDGFAP04085 AL121835.2-201ENST00000624253 3502 ntBASIC7.02□□□□□ -1.28
PDGFAP04085 PHACTR2P1-201ENST00000605639 1414 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 ITPK1-AS1-201ENST00000553639 4701 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDGFAP04085 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDGFAP04085 RN7SKP208-201ENST00000365474 361 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 ARMCX7P-201ENST00000372828 562 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AL139327.1-201ENST00000382988 348 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PDGFAP04085 CIR1P3-201ENST00000405137 479 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 MIR1277-201ENST00000408536 78 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 PPIAP30-201ENST00000415473 519 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC009480.2-201ENST00000422916 432 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 VN1R20P-201ENST00000425215 966 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC013403.1-201ENST00000436954 263 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 HMGN1P6-201ENST00000438508 291 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC7.02□□□□□ -1.29
PDGFAP04085 AL935212.3-201ENST00000450729 284 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 PPIA-203ENST00000451562 544 ntTSL 2 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC019084.1-201ENST00000457337 432 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 SNORD42A-201ENST00000459584 64 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 WBP1LP1-201ENST00000460451 896 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AL672167.3-201ENST00000465951 960 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 AP000797.1-201ENST00000478870 387 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AC041039.1-201ENST00000485656 536 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AC079768.1-201ENST00000503181 711 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PDGFAP04085 SNX5P1-201ENST00000505757 1041 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AC048346.1-201ENST00000510247 144 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 RNA5SP135-201ENST00000517019 125 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.02□□□□□ -1.29
PDGFAP04085 AL109628.1-201ENST00000556877 366 ntBASIC7.02□□□□□ -1.29
PDGFAP04085 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 TTN-AS1-215ENST00000585451 949 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 AC005884.2-201ENST00000593107 247 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.02□□□□□ -1.29
PDGFAP04085 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms