Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
APOEP02649 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.92□□□□□ -1.46
APOEP02649 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
APOEP02649 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
APOEP02649 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
APOEP02649 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 MRRFP1-201ENST00000435941 1675 ntBASIC5.91□□□□□ -1.46
APOEP02649 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 RN7SKP81-201ENST00000365603 331 ntBASIC5.91□□□□□ -1.46
APOEP02649 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.91□□□□□ -1.46
APOEP02649 AC087752.1-201ENST00000391360 558 ntBASIC5.91□□□□□ -1.46
APOEP02649 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.91□□□□□ -1.46
APOEP02649 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AC113412.1-201ENST00000425840 504 ntBASIC5.91□□□□□ -1.46
APOEP02649 AL662874.1-201ENST00000426065 230 ntBASIC5.91□□□□□ -1.46
APOEP02649 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 Z84478.1-201ENST00000438230 1219 ntBASIC5.91□□□□□ -1.46
APOEP02649 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.91□□□□□ -1.46
APOEP02649 IGLVIV-64-201ENST00000518581 301 ntBASIC5.91□□□□□ -1.46
APOEP02649 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.91□□□□□ -1.46
APOEP02649 MRPS16P1-201ENST00000523462 412 ntBASIC5.91□□□□□ -1.46
APOEP02649 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.91□□□□□ -1.46
APOEP02649 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.91□□□□□ -1.46
APOEP02649 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 AC135626.1-201ENST00000556983 435 ntBASIC5.91□□□□□ -1.46
APOEP02649 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.91□□□□□ -1.46
APOEP02649 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.91□□□□□ -1.46
APOEP02649 AC009962.1-201ENST00000567327 3813 ntBASIC5.91□□□□□ -1.46
APOEP02649 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 HIRAP1-201ENST00000605318 787 ntBASIC5.91□□□□□ -1.46
APOEP02649 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.91□□□□□ -1.46
APOEP02649 RN7SL787P-201ENST00000613000 284 ntBASIC5.91□□□□□ -1.46
APOEP02649 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AL353684.1-201ENST00000622677 1120 ntBASIC5.91□□□□□ -1.46
APOEP02649 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 AC008691.1-209ENST00000642094 814 ntBASIC5.91□□□□□ -1.46
APOEP02649 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 AC109446.4-201ENST00000623235 2755 ntBASIC5.91□□□□□ -1.46
APOEP02649 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
APOEP02649 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
APOEP02649 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.9□□□□□ -1.46
APOEP02649 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 RNA5SP30-201ENST00000365552 115 ntBASIC5.9□□□□□ -1.46
APOEP02649 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 RPS6P23-201ENST00000413224 722 ntBASIC5.9□□□□□ -1.46
APOEP02649 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 RNGTTP1-201ENST00000420965 728 ntBASIC5.9□□□□□ -1.46
APOEP02649 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.9□□□□□ -1.46
APOEP02649 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.9□□□□□ -1.46
APOEP02649 BX276092.6-201ENST00000430476 250 ntBASIC5.9□□□□□ -1.46
APOEP02649 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 AC002504.1-201ENST00000438281 691 ntBASIC5.9□□□□□ -1.46
APOEP02649 AC005297.1-201ENST00000444765 862 ntBASIC5.9□□□□□ -1.46
APOEP02649 EEF1B2P6-201ENST00000445713 673 ntBASIC5.9□□□□□ -1.46
APOEP02649 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
APOEP02649 YWHAEP1-201ENST00000453697 763 ntBASIC5.9□□□□□ -1.46
APOEP02649 BX276092.8-201ENST00000455722 250 ntBASIC5.9□□□□□ -1.46
APOEP02649 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.9□□□□□ -1.46
APOEP02649 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.9□□□□□ -1.46
APOEP02649 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.9□□□□□ -1.46
APOEP02649 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.9□□□□□ -1.46
APOEP02649 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.9□□□□□ -1.46
APOEP02649 TMEM97P2-201ENST00000517841 403 ntBASIC5.9□□□□□ -1.46
APOEP02649 IGKV3D-34-201ENST00000522638 302 ntBASIC5.9□□□□□ -1.46
APOEP02649 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.9□□□□□ -1.46
APOEP02649 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.9□□□□□ -1.46
APOEP02649 AL049872.1-201ENST00000556323 322 ntBASIC5.9□□□□□ -1.46
APOEP02649 AGGF1P7-201ENST00000562369 913 ntBASIC5.9□□□□□ -1.46
APOEP02649 AC015712.7-201ENST00000615211 635 ntBASIC5.9□□□□□ -1.46
APOEP02649 AC007842.1-201ENST00000597336 2039 ntBASIC5.9□□□□□ -1.47
APOEP02649 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.9□□□□□ -1.47
APOEP02649 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
APOEP02649 MRE11P1-201ENST00000464884 2127 ntBASIC5.9□□□□□ -1.47
APOEP02649 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.9□□□□□ -1.47
APOEP02649 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
APOEP02649 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
APOEP02649 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
APOEP02649 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
APOEP02649 AC026523.2-201ENST00000625039 7739 ntBASIC5.9□□□□□ -1.47
APOEP02649 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
APOEP02649 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
APOEP02649 MTCO1P7-201ENST00000419523 1542 ntBASIC5.89□□□□□ -1.47
APOEP02649 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms