Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.8□□□□□ -1.48
GPC4O75487 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
GPC4O75487 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC4O75487 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC4O75487 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
GPC4O75487 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
GPC4O75487 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.8□□□□□ -1.48
GPC4O75487 AC027088.4-201ENST00000611559 1947 ntBASIC5.8□□□□□ -1.48
GPC4O75487 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.79□□□□□ -1.48
GPC4O75487 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 RN7SKP81-201ENST00000365603 331 ntBASIC5.79□□□□□ -1.48
GPC4O75487 RPL11P3-201ENST00000395256 523 ntBASIC5.79□□□□□ -1.48
GPC4O75487 BX284632.2-201ENST00000421091 399 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC4O75487 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC4O75487 VTI1BP4-201ENST00000427516 527 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC4O75487 AL512605.1-202ENST00000441919 381 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AL359955.2-201ENST00000445380 353 ntBASIC5.79□□□□□ -1.48
GPC4O75487 MORF4L1P4-201ENST00000450245 976 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.79□□□□□ -1.48
GPC4O75487 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.79□□□□□ -1.48
GPC4O75487 PDCL3P4-201ENST00000489621 720 ntBASIC5.79□□□□□ -1.48
GPC4O75487 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 AC091078.2-201ENST00000557145 559 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 AL731537.2-201ENST00000561565 951 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 AL163952.1-202ENST00000569625 600 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AC027281.1-201ENST00000574178 758 ntBASIC5.79□□□□□ -1.48
GPC4O75487 MIR4776-2-201ENST00000580204 80 ntBASIC5.79□□□□□ -1.48
GPC4O75487 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.79□□□□□ -1.48
GPC4O75487 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.79□□□□□ -1.48
GPC4O75487 AC104307.1-201ENST00000616142 196 ntBASIC5.79□□□□□ -1.48
GPC4O75487 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 AL163152.1-201ENST00000642001 374 ntBASIC5.79□□□□□ -1.48
GPC4O75487 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
GPC4O75487 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.79□□□□□ -1.48
GPC4O75487 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.79□□□□□ -1.48
GPC4O75487 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
GPC4O75487 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
GPC4O75487 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 MAPK10-338ENST00000641647 3362 ntBASIC5.78□□□□□ -1.48
GPC4O75487 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 AC114774.1-201ENST00000507410 1770 ntBASIC5.78□□□□□ -1.48
GPC4O75487 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GPC4O75487 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
GPC4O75487 RNA5SP477-201ENST00000362639 119 ntBASIC5.78□□□□□ -1.48
GPC4O75487 AL358178.1-201ENST00000407698 397 ntBASIC5.78□□□□□ -1.48
GPC4O75487 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.78□□□□□ -1.48
GPC4O75487 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AL356806.1-201ENST00000422524 916 ntBASIC5.78□□□□□ -1.48
GPC4O75487 CRIP1P1-201ENST00000427567 185 ntBASIC5.78□□□□□ -1.48
GPC4O75487 AL590623.1-201ENST00000427864 105 ntBASIC5.78□□□□□ -1.48
GPC4O75487 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AL122020.1-201ENST00000472287 459 ntBASIC5.78□□□□□ -1.48
GPC4O75487 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 AC117525.1-201ENST00000515228 503 ntBASIC5.78□□□□□ -1.48
GPC4O75487 RNA5SP438-201ENST00000516561 112 ntBASIC5.78□□□□□ -1.48
GPC4O75487 MIR2117-201ENST00000516780 80 ntBASIC5.78□□□□□ -1.48
GPC4O75487 OR8Q1P-201ENST00000526467 655 ntBASIC5.78□□□□□ -1.48
GPC4O75487 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AL356801.1-201ENST00000559320 294 ntBASIC5.78□□□□□ -1.48
GPC4O75487 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AL513327.3-201ENST00000602618 469 ntBASIC5.78□□□□□ -1.48
GPC4O75487 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 AC026367.3-201ENST00000619032 590 ntBASIC5.78□□□□□ -1.48
GPC4O75487 AC025262.3-201ENST00000623666 360 ntBASIC5.78□□□□□ -1.48
GPC4O75487 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.78□□□□□ -1.48
GPC4O75487 AC079776.5-201ENST00000641920 211 ntBASIC5.78□□□□□ -1.48
GPC4O75487 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.78□□□□□ -1.48
GPC4O75487 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
GPC4O75487 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
GPC4O75487 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.78□□□□□ -1.48
GPC4O75487 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.77□□□□□ -1.48
GPC4O75487 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
GPC4O75487 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC4O75487 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.77□□□□□ -1.49
GPC4O75487 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms