Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 DET1-202ENST00000444300 2154 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 CAST-228ENST00000509903 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 OR4G1P-202ENST00000641173 1788 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AC011155.1-201ENST00000316512 456 ntBASIC8.44□□□□□ -1.06
RNF40O75150 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
RNF40O75150 RNA5SP161-201ENST00000363871 115 ntBASIC8.44□□□□□ -1.06
RNF40O75150 Y_RNA.202-201ENST00000364083 110 ntBASIC8.44□□□□□ -1.06
RNF40O75150 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 MIR595-201ENST00000384905 96 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AL590143.1-201ENST00000405071 138 ntBASIC8.44□□□□□ -1.06
RNF40O75150 SNORD3J-201ENST00000408473 190 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RNU2-5P-201ENST00000410533 180 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AC017104.2-201ENST00000417000 321 ntBASIC8.44□□□□□ -1.06
RNF40O75150 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC8.44□□□□□ -1.06
RNF40O75150 NENFP1-201ENST00000419476 466 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RBMY2FP-202ENST00000420346 1263 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AL353193.1-201ENST00000421444 268 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RIMKLBP2-201ENST00000424737 654 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AC130472.1-201ENST00000427885 309 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RPS21P1-201ENST00000434479 247 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 AC079448.1-201ENST00000449377 373 ntBASIC8.44□□□□□ -1.06
RNF40O75150 GAPDHP17-201ENST00000449858 1001 ntBASIC8.44□□□□□ -1.06
RNF40O75150 SUMO1P2-201ENST00000452524 304 ntBASIC8.44□□□□□ -1.06
RNF40O75150 MTND1P9-201ENST00000453775 944 ntBASIC8.44□□□□□ -1.06
RNF40O75150 MTCO2P29-201ENST00000465212 189 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RN7SL91P-201ENST00000469313 291 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC8.44□□□□□ -1.06
RNF40O75150 RPL35P6-201ENST00000490024 372 ntBASIC8.44□□□□□ -1.06
RNF40O75150 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC8.44□□□□□ -1.06
RNF40O75150 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.44□□□□□ -1.06
RNF40O75150 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.44□□□□□ -1.06
RNF40O75150 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 RAD21-204ENST00000518055 896 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 BRD9P1-201ENST00000529855 560 ntBASIC8.44□□□□□ -1.06
RNF40O75150 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC8.44□□□□□ -1.06
RNF40O75150 AP003034.1-201ENST00000534621 422 ntBASIC8.44□□□□□ -1.06
RNF40O75150 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 AC079313.2-202ENST00000552053 511 ntTSL 3 BASIC8.44□□□□□ -1.06
RNF40O75150 AC136618.2-201ENST00000575091 400 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AC010327.2-201ENST00000587647 488 ntBASIC8.44□□□□□ -1.06
RNF40O75150 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC8.44□□□□□ -1.06
RNF40O75150 AC243960.3-201ENST00000599316 580 ntTSL 4 BASIC8.44□□□□□ -1.06
RNF40O75150 AL391646.1-201ENST00000603860 190 ntBASIC8.44□□□□□ -1.06
RNF40O75150 RNU6-88P-201ENST00000606801 100 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AL137000.1-201ENST00000610528 1244 ntBASIC8.44□□□□□ -1.06
RNF40O75150 pRNA.12-201ENST00000614353 90 ntBASIC8.44□□□□□ -1.06
RNF40O75150 pRNA.3-201ENST00000615048 90 ntBASIC8.44□□□□□ -1.06
RNF40O75150 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 TPTEP1-208ENST00000636884 213 ntBASIC8.44□□□□□ -1.06
RNF40O75150 AF228730.7-203ENST00000641436 1804 ntBASIC8.44□□□□□ -1.06
RNF40O75150 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 AL161725.1-201ENST00000591577 1351 ntTSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 NLRP8-202ENST00000590542 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
RNF40O75150 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
RNF40O75150 AGO1-202ENST00000373206 3996 ntTSL 2 BASIC8.44□□□□□ -1.06
RNF40O75150 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
RNF40O75150 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.43□□□□□ -1.06
RNF40O75150 ESRP1-203ENST00000433389 3770 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 OR52B1P-201ENST00000316506 909 ntBASIC8.43□□□□□ -1.06
RNF40O75150 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
RNF40O75150 RNU2-62P-201ENST00000410868 191 ntBASIC8.43□□□□□ -1.06
RNF40O75150 RNU4-61P-201ENST00000411243 107 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC109780.2-201ENST00000413467 845 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC090617.1-201ENST00000413674 323 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 AC019181.1-201ENST00000417151 310 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC073136.2-201ENST00000417282 849 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC006065.1-201ENST00000422539 802 ntBASIC8.43□□□□□ -1.06
RNF40O75150 GAPDHP51-201ENST00000426454 1000 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 CYCSP11-201ENST00000436426 315 ntBASIC8.43□□□□□ -1.06
RNF40O75150 PHBP4-201ENST00000437447 837 ntBASIC8.43□□□□□ -1.06
RNF40O75150 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 WDR82P1-201ENST00000439836 939 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AL831737.1-201ENST00000441288 271 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC8.43□□□□□ -1.06
RNF40O75150 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
RNF40O75150 GGT3P-203ENST00000445651 368 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.43□□□□□ -1.06
RNF40O75150 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC8.43□□□□□ -1.06
RNF40O75150 NDUFA5P7-201ENST00000452914 242 ntBASIC8.43□□□□□ -1.06
RNF40O75150 MTND5P22-201ENST00000458380 195 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC096741.1-201ENST00000472250 846 ntBASIC8.43□□□□□ -1.06
RNF40O75150 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC8.43□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms