Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
HCN1O60741 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.36□□□□□ -1.55
HCN1O60741 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.36□□□□□ -1.55
HCN1O60741 RNU1-88P-201ENST00000459274 128 ntBASIC5.36□□□□□ -1.55
HCN1O60741 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 RN7SL273P-201ENST00000481561 299 ntBASIC5.36□□□□□ -1.55
HCN1O60741 RPL38P3-201ENST00000484463 213 ntBASIC5.36□□□□□ -1.55
HCN1O60741 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.36□□□□□ -1.55
HCN1O60741 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.36□□□□□ -1.55
HCN1O60741 AC106872.4-201ENST00000510050 523 ntBASIC5.36□□□□□ -1.55
HCN1O60741 TMEM97P2-201ENST00000517841 403 ntBASIC5.36□□□□□ -1.55
HCN1O60741 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.36□□□□□ -1.55
HCN1O60741 AC138832.1-201ENST00000522871 556 ntBASIC5.36□□□□□ -1.55
HCN1O60741 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.36□□□□□ -1.55
HCN1O60741 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.36□□□□□ -1.55
HCN1O60741 ADAM3B-201ENST00000569937 840 ntBASIC5.36□□□□□ -1.55
HCN1O60741 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.36□□□□□ -1.55
HCN1O60741 AC010487.1-201ENST00000594408 1172 ntBASIC5.36□□□□□ -1.55
HCN1O60741 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.36□□□□□ -1.55
HCN1O60741 AL513327.3-201ENST00000602618 469 ntBASIC5.36□□□□□ -1.55
HCN1O60741 AC145423.1-201ENST00000605712 336 ntBASIC5.36□□□□□ -1.55
HCN1O60741 AC126175.1-201ENST00000617041 758 ntBASIC5.36□□□□□ -1.55
HCN1O60741 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 AC011503.2-201ENST00000594230 1500 ntBASIC5.36□□□□□ -1.55
HCN1O60741 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.36□□□□□ -1.55
HCN1O60741 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.36□□□□□ -1.55
HCN1O60741 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.36□□□□□ -1.55
HCN1O60741 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
HCN1O60741 GVINP1-202ENST00000531871 7271 ntBASIC5.36□□□□□ -1.55
HCN1O60741 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
HCN1O60741 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 AC068870.3-201ENST00000625077 2536 ntBASIC5.35□□□□□ -1.55
HCN1O60741 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HCN1O60741 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HCN1O60741 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.35□□□□□ -1.55
HCN1O60741 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 BX323845.3-201ENST00000428215 527 ntBASIC5.35□□□□□ -1.55
HCN1O60741 AL136231.1-201ENST00000429407 730 ntBASIC5.35□□□□□ -1.55
HCN1O60741 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 AC023271.1-201ENST00000445936 1090 ntBASIC5.35□□□□□ -1.55
HCN1O60741 SEPT7P3-201ENST00000455017 621 ntBASIC5.35□□□□□ -1.55
HCN1O60741 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 RN7SL197P-201ENST00000466981 299 ntBASIC5.35□□□□□ -1.55
HCN1O60741 RN7SL174P-201ENST00000475578 289 ntBASIC5.35□□□□□ -1.55
HCN1O60741 RN7SL101P-201ENST00000496350 279 ntBASIC5.35□□□□□ -1.55
HCN1O60741 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 MIR2117-201ENST00000516780 80 ntBASIC5.35□□□□□ -1.55
HCN1O60741 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 EIF4EP5-201ENST00000528228 640 ntBASIC5.35□□□□□ -1.55
HCN1O60741 HMGN2P36-201ENST00000529541 409 ntBASIC5.35□□□□□ -1.55
HCN1O60741 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
HCN1O60741 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
HCN1O60741 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 PARP4P2-201ENST00000446672 3326 ntBASIC5.35□□□□□ -1.55
HCN1O60741 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.35□□□□□ -1.55
HCN1O60741 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.35□□□□□ -1.55
HCN1O60741 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
HCN1O60741 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
HCN1O60741 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCN1O60741 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HCN1O60741 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HCN1O60741 RNF19BPY-201ENST00000458209 1550 ntBASIC5.34□□□□□ -1.55
HCN1O60741 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.34□□□□□ -1.55
HCN1O60741 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCN1O60741 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCN1O60741 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.34□□□□□ -1.55
HCN1O60741 TCP11X1-202ENST00000622971 1372 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms