Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SMAD6O43541 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC092642.1-201ENST00000392417 425 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 RNA5SP178-201ENST00000410380 128 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AC019205.1-201ENST00000421830 730 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC106901.1-201ENST00000425086 698 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 PRUNEP1-201ENST00000425846 705 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 YWHAEP1-201ENST00000453697 763 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 RPS27AP2-201ENST00000457576 465 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 RNU1-88P-201ENST00000459274 128 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC022215.1-201ENST00000481770 362 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 SNORA26.10-201ENST00000516427 141 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 MRPS16P1-201ENST00000523462 412 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC010547.6-201ENST00000571789 193 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 SNORD95-201ENST00000579879 68 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.85□□□□□ -1.47
SMAD6O43541 MIR4260-201ENST00000583107 67 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 MIR4420-201ENST00000583944 77 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.85□□□□□ -1.47
SMAD6O43541 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 AC068870.3-201ENST00000625077 2536 ntBASIC5.85□□□□□ -1.47
SMAD6O43541 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SMAD6O43541 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.85□□□□□ -1.47
SMAD6O43541 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SMAD6O43541 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SMAD6O43541 SRRM1P3-201ENST00000426911 2678 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 SNORD1C-201ENST00000363315 78 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 RNA5SP242-201ENST00000364171 118 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 SNORA72.3-201ENST00000365074 132 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.84□□□□□ -1.47
SMAD6O43541 RN7SKP206-201ENST00000410823 293 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 RN7SKP286-201ENST00000410894 299 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.84□□□□□ -1.47
SMAD6O43541 RPL34P3-201ENST00000421454 338 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AL354692.1-201ENST00000423044 315 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AC021876.1-201ENST00000425959 359 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AL022331.1-201ENST00000429025 477 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC002504.1-201ENST00000438281 691 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 EEF1B2P6-201ENST00000445713 673 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 FCF1P7-201ENST00000451185 558 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 LRRC37A14P-201ENST00000452297 462 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.84□□□□□ -1.47
SMAD6O43541 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SMAD6O43541 RPL5P16-201ENST00000471467 790 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 RN7SL717P-201ENST00000478343 297 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SMAD6O43541 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.84□□□□□ -1.47
SMAD6O43541 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.84□□□□□ -1.47
SMAD6O43541 RNU6-615P-201ENST00000516065 106 ntBASIC5.84□□□□□ -1.47
SMAD6O43541 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.84□□□□□ -1.47
SMAD6O43541 OR8K2P-201ENST00000524645 927 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms