Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RN7SL170P-201ENST00000487098 295 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AP002453.1-201ENST00000492327 668 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 BTG4P1-201ENST00000510421 183 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 MAST4-IT1-201ENST00000514241 658 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 RNA5SP464-201ENST00000516251 108 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AP006245.2-201ENST00000522004 300 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AL121594.2-201ENST00000541658 472 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AC006512.2-201ENST00000543250 486 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 NMNAT1P5-201ENST00000559657 841 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC115989.2-201ENST00000578640 563 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC5.47□□□□□ -1.53
PDLIM1O00151 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AC026367.3-201ENST00000619032 590 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AC021766.1-201ENST00000624404 741 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 AC073593.1-201ENST00000624500 411 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PDLIM1O00151 AL513548.1-201ENST00000562904 1724 ntBASIC5.47□□□□□ -1.53
PDLIM1O00151 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
PDLIM1O00151 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDLIM1O00151 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDLIM1O00151 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDLIM1O00151 AC007938.2-201ENST00000604666 2634 ntBASIC5.46□□□□□ -1.53
PDLIM1O00151 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.53
PDLIM1O00151 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PDLIM1O00151 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDLIM1O00151 RN7SKP78-201ENST00000364711 318 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 RNA5SP211-201ENST00000365516 117 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PDLIM1O00151 GCNT1P4-201ENST00000404096 329 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 RN7SKP144-201ENST00000411108 279 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 CBX1P3-201ENST00000413296 527 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC007679.3-201ENST00000434035 414 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC097463.1-201ENST00000447288 481 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC021660.1-201ENST00000465006 554 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 AC006539.1-201ENST00000481419 501 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AP002373.2-201ENST00000541631 1060 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 MIR4502-201ENST00000580432 81 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.46□□□□□ -1.54
PDLIM1O00151 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 AL596275.2-204ENST00000641628 552 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 AL596275.2-206ENST00000641957 626 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.46□□□□□ -1.54
PDLIM1O00151 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.46□□□□□ -1.54
PDLIM1O00151 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 AC000123.3-201ENST00000624029 4975 ntBASIC5.46□□□□□ -1.54
PDLIM1O00151 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDLIM1O00151 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 OR51H2P-202ENST00000641424 3046 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 RBMY1HP-201ENST00000382759 1389 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PDLIM1O00151 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.45□□□□□ -1.54
PDLIM1O00151 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.45□□□□□ -1.54
PDLIM1O00151 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDLIM1O00151 NANOGP4-201ENST00000427230 913 ntBASIC5.45□□□□□ -1.54
PDLIM1O00151 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.45□□□□□ -1.54
PDLIM1O00151 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms