Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM49D1C9J1S8 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC017019.1-201ENST00000426129 261 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 HMGN2P27-201ENST00000427352 270 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 HSPD1P12-201ENST00000429127 1069 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 TIMM8BP2-201ENST00000445940 251 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 RPS23P6-201ENST00000466136 431 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AP000797.2-201ENST00000475768 606 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC087672.1-201ENST00000479876 766 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 IMPA1P1-201ENST00000510718 842 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC016559.2-201ENST00000510759 359 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC114781.3-201ENST00000512083 142 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 MRPS16P1-201ENST00000523462 412 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AP000648.1-201ENST00000529682 397 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC084121.1-201ENST00000533882 835 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 LINC00556-201ENST00000569603 412 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 MTCYBP13-201ENST00000578634 1093 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 SETP3-201ENST00000581726 813 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AL031601.1-201ENST00000605702 394 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AC008833.1-201ENST00000611633 691 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 AL390318.1-201ENST00000624564 687 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 OR8G3P-202ENST00000641572 1255 ntBASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM49D1C9J1S8 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM49D1C9J1S8 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
TRIM49D1C9J1S8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM49D1C9J1S8 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
TRIM49D1C9J1S8 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 MIR1275-201ENST00000408770 80 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 RMRPP5-201ENST00000411156 267 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AKR1B10P1-201ENST00000425765 942 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 EEF1B2P3-201ENST00000447718 678 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC019084.1-201ENST00000457337 432 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 RNA5SP473-201ENST00000516402 125 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 HMGB1P42-201ENST00000532126 553 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC107958.1-201ENST00000556576 290 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 PRPF19P1-201ENST00000584766 898 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC015802.2-201ENST00000589690 189 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC125494.2-201ENST00000602431 657 ntBASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
TRIM49D1C9J1S8 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms