Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 PMS2P3-207ENST00000529061 717 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 BNIP3P1-201ENST00000547295 580 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AGGF1P7-201ENST00000562369 913 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 RN7SL435P-201ENST00000584418 282 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 MIR212-201ENST00000586026 110 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC108738.1-201ENST00000603703 237 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 MIR6849-201ENST00000618543 69 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AL357562.1-201ENST00000624911 609 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 Z83820.1-201ENST00000456978 1499 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC245100.2-201ENST00000454544 1679 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 AF287957.1-201ENST00000607368 1595 ntBASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
RBFOX3A6NFN3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 FANCD2P2-201ENST00000437591 1400 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RBPJP7-201ENST00000442803 1447 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC007996.1-201ENST00000620414 2821 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 UBBP2-201ENST00000376781 231 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC003045.1-201ENST00000398779 713 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RPL10P10-201ENST00000403509 664 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL359643.1-201ENST00000404109 423 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 MIR1271-201ENST00000408537 86 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RNU2-22P-201ENST00000411266 212 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 GAPDHP19-201ENST00000431768 1005 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL389925.1-201ENST00000432257 728 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL022324.2-201ENST00000434827 780 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 KF459542.1-201ENST00000450908 553 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AZGP1P2-201ENST00000454506 345 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RN7SL393P-201ENST00000463588 296 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC015524.1-201ENST00000491585 472 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC090638.1-201ENST00000498296 909 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RN7SL104P-201ENST00000498686 293 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC021106.1-201ENST00000509020 1058 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 IMPA1P1-201ENST00000510718 842 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC233702.9-201ENST00000581528 203 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC009237.13-201ENST00000603193 276 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL008582.1-201ENST00000609612 442 ntBASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
RBFOX3A6NFN3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms