Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SOD1P2-201ENST00000563903 451 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 SNORA70D-201ENST00000578836 135 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 FAM106CP-201ENST00000582212 507 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AL121809.2-201ENST00000613169 341 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC006840.1-201ENST00000623069 542 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 CLUHP10-201ENST00000631979 980 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 OR5H6-203ENST00000642105 978 ntBASIC6.23□□□□□ -1.41
SHISA3A0PJX4 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 TMEM230-204ENST00000379277 1536 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
SHISA3A0PJX4 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL391261.1-201ENST00000555712 1479 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AP002833.3-201ENST00000625075 2265 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LYARP1-201ENST00000436977 1501 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AMELY-201ENST00000215479 802 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 OR9G4-201ENST00000302957 984 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 TMSB4XP2-201ENST00000335179 210 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RNU4-59P-201ENST00000364447 116 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RNA5SP79-201ENST00000365193 109 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RNU1-16P-201ENST00000365477 164 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 SNORA35-201ENST00000386104 128 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RN7SKP56-201ENST00000410513 331 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RNU6-77P-201ENST00000410554 91 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 MTCO1P17-201ENST00000411522 491 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL590806.1-201ENST00000415818 853 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 Z97055.1-201ENST00000419730 712 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 GLRXP1-201ENST00000423261 334 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 FTH1P16-201ENST00000435241 552 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 MTND1P28-201ENST00000435623 950 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 HMGB1P45-201ENST00000435986 653 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 SNRPEP8-201ENST00000442866 260 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC093166.3-201ENST00000448785 303 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 PAXBP1P1-201ENST00000449315 447 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC073522.1-201ENST00000483312 377 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 DYNLL1P6-201ENST00000503440 264 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC114781.4-201ENST00000513707 639 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 RFPL4AP3-201ENST00000515267 345 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 IGHV3-63-201ENST00000518422 341 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 PFDN5-211ENST00000550846 392 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC009171.1-201ENST00000572673 266 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 USP2-AS1-205ENST00000578923 895 ntTSL 2 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ZNF559-205ENST00000586255 1016 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 MCM3AP-AS1-207ENST00000588753 589 ntTSL 4 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL078623.1-201ENST00000602702 907 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL137072.1-201ENST00000603444 466 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL356052.1-201ENST00000605764 376 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AP001330.5-201ENST00000607176 411 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC007014.2-201ENST00000615581 479 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC131009.3-201ENST00000621809 287 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AL356596.1-201ENST00000624230 379 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 AC099654.5-201ENST00000636479 350 ntBASIC6.22□□□□□ -1.41
SHISA3A0PJX4 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC6.22□□□□□ -1.41
SHISA3A0PJX4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms