Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SEPT10P1-201ENST00000517342 1162 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC079905.1-201ENST00000549280 475 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC006530.1-201ENST00000555980 571 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC026826.3-201ENST00000561747 158 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC009779.8-202ENST00000607990 932 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 MIR6793-201ENST00000612376 63 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-368P-201ENST00000620928 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNU6-538P-201ENST00000622329 107 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL596275.2-207ENST00000641188 675 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AP000473.2-201ENST00000602659 1537 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 AL031595.2-201ENST00000624215 19071 ntBASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5□□□□□ -1.61
RHBDD3Q9Y3P4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 RNU1-146P-201ENST00000364015 165 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AL672167.2-201ENST00000377164 879 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 HSD17B7P1-201ENST00000412419 1017 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 SEPT7P8-201ENST00000413308 775 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 VN1R110P-201ENST00000438988 971 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 RBMY2TP-201ENST00000451162 947 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC093166.4-201ENST00000457867 318 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AGGF1P3-201ENST00000493675 1213 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 RN7SL57P-201ENST00000493687 290 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 RPSAP51-201ENST00000497462 645 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC105384.2-201ENST00000508433 640 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 GLUD1P3-202ENST00000508551 200 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 SCARNA18.1-201ENST00000516330 83 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 CETN3-206ENST00000522864 738 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PCNAP4-201ENST00000532690 730 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC084824.2-201ENST00000548906 345 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 AL035661.1-201ENST00000620459 1144 ntBASIC4.99□□□□□ -1.61
RHBDD3Q9Y3P4 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms