Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 THAP12P5-201ENST00000405864 2275 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 SRRM1P3-201ENST00000426911 2678 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RNA5SP394-201ENST00000364216 119 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 HMGB1P20-201ENST00000402555 677 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 LYPLA1P3-201ENST00000402650 695 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RIMKLBP2-201ENST00000424737 654 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RPL7P56-201ENST00000429441 717 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 NDUFB4P8-201ENST00000435351 367 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC011476.1-201ENST00000466725 307 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC087672.1-201ENST00000479876 766 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RNA5SP271-201ENST00000516700 88 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 TOMM20P1-201ENST00000534518 427 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC009852.2-201ENST00000567898 485 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AL499605.1-201ENST00000604628 403 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 LSM1P2-201ENST00000604911 322 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AL390318.1-201ENST00000624564 687 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 AC119674.1-217ENST00000641942 1086 ntBASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
RNF11Q9Y3C5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 MT-RNR2-201ENST00000387347 1559 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 MRRFP1-201ENST00000435941 1675 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC023632.6-201ENST00000624338 2177 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AL603750.1-201ENST00000624216 1717 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC092681.1-201ENST00000297369 291 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 OR52B3P-201ENST00000314715 928 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC107977.1-201ENST00000355745 939 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 MIR375-201ENST00000362103 64 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 VN1R12P-201ENST00000403778 876 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 RN7SKP240-201ENST00000410583 375 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC007161.1-204ENST00000423039 460 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 RN7SL741P-201ENST00000482473 289 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC079064.1-201ENST00000528365 362 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC107958.1-201ENST00000556576 290 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC009237.13-201ENST00000603193 276 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC108865.2-201ENST00000606881 432 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AL139124.1-201ENST00000609123 421 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC025574.2-201ENST00000615621 514 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC026367.3-201ENST00000619032 590 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 AC079097.1-201ENST00000512187 1399 ntBASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF11Q9Y3C5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 RNA5SP131-201ENST00000365452 119 ntBASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF11Q9Y3C5 CXADRP1-201ENST00000398098 1095 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms