Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 RN7SL326P-201ENST00000477493 296 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 OR4D12P-201ENST00000509361 911 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 RNU6-513P-201ENST00000516104 104 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 RNA5SP230-201ENST00000517039 122 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 RNA5SP400-201ENST00000517155 111 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 EIF4A2P5-201ENST00000529914 499 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AP005262.1-201ENST00000582646 997 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC008833.1-201ENST00000611633 691 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 RNA5SP440-201ENST00000612665 119 ntBASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.84□□□□□ -1.47
TRIM4Q9C037 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TRIM4Q9C037 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TRIM4Q9C037 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM4Q9C037 PROS2P-201ENST00000474651 1951 ntBASIC5.84□□□□□ -1.48
TRIM4Q9C037 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
TRIM4Q9C037 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
TRIM4Q9C037 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
TRIM4Q9C037 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL137058.3-201ENST00000624531 3099 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 RN7SKP115-201ENST00000363177 317 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 RNU1-49P-201ENST00000363468 159 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 RPS27P18-201ENST00000431701 247 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 GAPDHP58-201ENST00000438477 1006 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AC092106.1-201ENST00000444291 373 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL133351.3-201ENST00000454998 193 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 RPSAP51-201ENST00000497462 645 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AP003396.4-201ENST00000527574 265 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 HIGD1AP5-201ENST00000529959 259 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 BNIP3P41-202ENST00000616656 861 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL512652.1-201ENST00000619006 500 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL137067.2-201ENST00000621202 131 ntBASIC5.83□□□□□ -1.48
TRIM4Q9C037 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
TRIM4Q9C037 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TRIM4Q9C037 AL078621.3-201ENST00000623707 2042 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 CCNT2P1-201ENST00000423082 1315 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TRIM4Q9C037 SPTLC1P2-201ENST00000407089 121 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 RPS3AP2-201ENST00000407190 754 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 OR3A2-201ENST00000408891 1076 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC092017.2-201ENST00000427600 362 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 BX119321.1-201ENST00000428912 797 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 AL512593.1-201ENST00000444758 779 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AL590004.3-202ENST00000445883 451 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 RN7SL104P-201ENST00000498686 293 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 CYP4F27P-201ENST00000514557 494 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC079600.1-201ENST00000550326 297 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.82□□□□□ -1.48
TRIM4Q9C037 SUMO2P15-201ENST00000604285 278 ntBASIC5.82□□□□□ -1.48
TRIM4Q9C037 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms