Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC096947.1-201ENST00000603233 470 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC012368.3-201ENST00000604190 219 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 RPSAP75-201ENST00000605848 301 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AL355802.4-201ENST00000607635 548 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC120053.1-201ENST00000607706 736 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC4.47□□□□□ -1.69
VGLL1Q99990 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VGLL1Q99990 MIR6885-201ENST00000612241 66 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC109809.1-201ENST00000619665 545 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC022960.3-201ENST00000619794 441 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC089999.3-201ENST00000622440 577 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC4.47□□□□□ -1.69
VGLL1Q99990 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.47□□□□□ -1.69
VGLL1Q99990 AC006927.4-201ENST00000639187 543 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 AC026523.2-201ENST00000625039 7739 ntBASIC4.47□□□□□ -1.69
VGLL1Q99990 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.47□□□□□ -1.69
VGLL1Q99990 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.47□□□□□ -1.69
VGLL1Q99990 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
VGLL1Q99990 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VGLL1Q99990 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VGLL1Q99990 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VGLL1Q99990 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VGLL1Q99990 AC144833.1-201ENST00000567953 4089 ntBASIC4.46□□□□□ -1.69
VGLL1Q99990 AC002525.1-201ENST00000624392 1622 ntBASIC4.46□□□□□ -1.69
VGLL1Q99990 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
VGLL1Q99990 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.69
VGLL1Q99990 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
VGLL1Q99990 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VGLL1Q99990 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.46□□□□□ -1.69
VGLL1Q99990 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.69
VGLL1Q99990 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VGLL1Q99990 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 GCNT6-201ENST00000379591 934 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 RPL35AP31-201ENST00000418340 337 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 RPL12P12-201ENST00000424633 501 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC013410.1-201ENST00000436223 1232 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 ARMC4P1-201ENST00000438905 707 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC234771.2-201ENST00000445718 597 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 FRG2FP-204ENST00000453982 852 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 C1DP3-201ENST00000455013 423 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC104164.1-201ENST00000460282 590 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 TRBV8-1-201ENST00000481590 279 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 SNRPCP11-201ENST00000492453 205 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC016550.1-201ENST00000505348 785 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC112198.4-201ENST00000515450 351 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 SNORA74.1-201ENST00000516320 180 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 IGHV7-34-1-201ENST00000519200 350 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.46□□□□□ -1.7
VGLL1Q99990 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC027176.2-201ENST00000559166 746 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC009712.1-201ENST00000564938 316 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC006115.2-201ENST00000596823 202 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AL133481.2-203ENST00000607558 139 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC090912.3-201ENST00000609775 533 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC096586.2-201ENST00000610260 441 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 CR589904.2-201ENST00000612533 440 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AL050303.3-201ENST00000613704 284 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 RFPL4AP6-201ENST00000616792 846 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AL163051.2-201ENST00000618976 735 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 AC006600.2-201ENST00000624834 2506 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 AC020633.1-201ENST00000468439 2247 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.46□□□□□ -1.7
VGLL1Q99990 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VGLL1Q99990 AL627171.1-201ENST00000618845 1308 ntBASIC4.46□□□□□ -1.7
VGLL1Q99990 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.46□□□□□ -1.7
VGLL1Q99990 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.45□□□□□ -1.7
VGLL1Q99990 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.45□□□□□ -1.7
VGLL1Q99990 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VGLL1Q99990 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VGLL1Q99990 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VGLL1Q99990 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VGLL1Q99990 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
VGLL1Q99990 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 147.2 ms