Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC104966.1-201ENST00000467010 1464 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.07□□□□□ -1.6
SSX3Q99909 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SSX3Q99909 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC022164.1-201ENST00000568767 2673 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 RNA5SP346-201ENST00000363541 121 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 RNA5SP433-201ENST00000364491 114 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX3Q99909 NPM1P10-201ENST00000398310 865 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 OR7E156P-201ENST00000400303 464 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX3Q99909 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC007679.3-201ENST00000434035 414 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AL512637.1-201ENST00000439523 1231 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AMYP1-201ENST00000440059 1023 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 RPL31P20-201ENST00000449593 360 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 AP002884.1-201ENST00000479691 655 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX3Q99909 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC009120.3-201ENST00000563335 499 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
SSX3Q99909 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 MRPS21P8-201ENST00000569196 235 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AC027216.1-201ENST00000577726 685 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 DPRXP4-201ENST00000578053 568 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AP001357.1-201ENST00000586304 1053 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AL139407.1-201ENST00000613826 1175 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 MIR6778-201ENST00000617912 73 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
SSX3Q99909 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 AC027228.2-201ENST00000567141 2154 ntBASIC5.06□□□□□ -1.6
SSX3Q99909 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SSX3Q99909 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.06□□□□□ -1.6
SSX3Q99909 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.06□□□□□ -1.6
SSX3Q99909 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC104260.2-201ENST00000623551 3497 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SSX3Q99909 MIR7-1-201ENST00000384871 110 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AL096800.1-201ENST00000405326 893 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 U3.43-201ENST00000410734 213 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 RN7SKP121-201ENST00000410842 305 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.05□□□□□ -1.6
SSX3Q99909 RPL6P30-201ENST00000443382 862 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 MORF4-201ENST00000447135 971 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 CCRL1P1-201ENST00000449542 1053 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AL445687.2-201ENST00000458156 728 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.05□□□□□ -1.6
SSX3Q99909 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.05□□□□□ -1.6
SSX3Q99909 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 AC036111.2-201ENST00000533247 901 ntBASIC5.05□□□□□ -1.6
SSX3Q99909 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.05□□□□□ -1.6
SSX3Q99909 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms