Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC099535.1-201ENST00000408928 371 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RN7SKP279-201ENST00000411383 298 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.71□□□□□ -1.5
NDNQ99608 AC013268.2-201ENST00000420753 337 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.71□□□□□ -1.5
NDNQ99608 AC126120.1-201ENST00000431082 470 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC023271.1-201ENST00000445936 1090 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RPL12P24-201ENST00000474907 486 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RPS26P24-201ENST00000497656 331 ntBASIC5.71□□□□□ -1.5
NDNQ99608 GAPDHP71-201ENST00000511530 1003 ntBASIC5.71□□□□□ -1.5
NDNQ99608 OR5H7P-201ENST00000514084 930 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC021146.10-201ENST00000515628 706 ntBASIC5.71□□□□□ -1.5
NDNQ99608 Y_RNA.667-201ENST00000516212 107 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RNU6-751P-201ENST00000516382 101 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RNA5SP438-201ENST00000516561 112 ntBASIC5.71□□□□□ -1.5
NDNQ99608 RN7SKP5-201ENST00000517045 272 ntBASIC5.71□□□□□ -1.5
NDNQ99608 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.71□□□□□ -1.5
NDNQ99608 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.71□□□□□ -1.5
NDNQ99608 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.71□□□□□ -1.5
NDNQ99608 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.71□□□□□ -1.5
NDNQ99608 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.71□□□□□ -1.5
NDNQ99608 ZNF322P1-201ENST00000568013 1209 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC107993.1-201ENST00000591343 684 ntBASIC5.71□□□□□ -1.5
NDNQ99608 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.71□□□□□ -1.5
NDNQ99608 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.71□□□□□ -1.5
NDNQ99608 MIR7109-201ENST00000613748 65 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC073592.6-201ENST00000624271 415 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC103703.1-201ENST00000634783 663 ntBASIC5.71□□□□□ -1.5
NDNQ99608 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NDNQ99608 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
NDNQ99608 AL034546.1-201ENST00000623740 3693 ntBASIC5.71□□□□□ -1.5
NDNQ99608 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NDNQ99608 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NDNQ99608 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.71□□□□□ -1.5
NDNQ99608 TCP1P3-201ENST00000414406 1498 ntBASIC5.71□□□□□ -1.5
NDNQ99608 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.71□□□□□ -1.5
NDNQ99608 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
NDNQ99608 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 PDZK1P1-202ENST00000425209 1350 ntBASIC5.7□□□□□ -1.5
NDNQ99608 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NDNQ99608 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NDNQ99608 RNA5SP477-201ENST00000362639 119 ntBASIC5.7□□□□□ -1.5
NDNQ99608 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.7□□□□□ -1.5
NDNQ99608 MIR130A-201ENST00000385274 89 ntBASIC5.7□□□□□ -1.5
NDNQ99608 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NDNQ99608 AC019205.1-201ENST00000421830 730 ntBASIC5.7□□□□□ -1.5
NDNQ99608 VN1R21P-201ENST00000426703 765 ntBASIC5.7□□□□□ -1.5
NDNQ99608 BX323845.3-201ENST00000428215 527 ntBASIC5.7□□□□□ -1.5
NDNQ99608 NDUFS5P5-201ENST00000437256 321 ntBASIC5.7□□□□□ -1.5
NDNQ99608 VN1R110P-201ENST00000438988 971 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.7□□□□□ -1.5
NDNQ99608 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 MEMO1P4-201ENST00000453590 386 ntBASIC5.7□□□□□ -1.5
NDNQ99608 RN7SL197P-201ENST00000466981 299 ntBASIC5.7□□□□□ -1.5
NDNQ99608 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.7□□□□□ -1.5
NDNQ99608 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.7□□□□□ -1.5
NDNQ99608 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.7□□□□□ -1.5
NDNQ99608 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 AC114781.3-201ENST00000512083 142 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.7□□□□□ -1.5
NDNQ99608 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 AC027369.2-201ENST00000528030 440 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AC024405.1-201ENST00000532521 1042 ntBASIC5.7□□□□□ -1.5
NDNQ99608 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 AL356801.1-201ENST00000559320 294 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.7□□□□□ -1.5
NDNQ99608 AC243960.7-201ENST00000623532 707 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.7□□□□□ -1.5
NDNQ99608 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
NDNQ99608 AL022311.1-201ENST00000623726 19416 ntBASIC5.7□□□□□ -1.5
NDNQ99608 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 AC104260.2-201ENST00000623551 3497 ntBASIC5.7□□□□□ -1.5
NDNQ99608 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NDNQ99608 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.7□□□□□ -1.5
NDNQ99608 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.7□□□□□ -1.5
NDNQ99608 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NDNQ99608 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NDNQ99608 MTCO1P22-201ENST00000604619 1360 ntBASIC5.69□□□□□ -1.5
NDNQ99608 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NDNQ99608 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NDNQ99608 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NDNQ99608 AC019072.1-201ENST00000604535 1551 ntBASIC5.69□□□□□ -1.5
NDNQ99608 RN7SKP187-201ENST00000365536 330 ntBASIC5.69□□□□□ -1.5
NDNQ99608 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.69□□□□□ -1.5
NDNQ99608 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.69□□□□□ -1.5
NDNQ99608 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.69□□□□□ -1.5
NDNQ99608 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.69□□□□□ -1.5
NDNQ99608 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms