Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PKP4Q99569 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PKP4Q99569 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
PKP4Q99569 RNU6-729P-201ENST00000384399 107 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 NPM1P37-201ENST00000403105 874 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 RN7SKP29-201ENST00000410957 272 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.68□□□□□ -1.5
PKP4Q99569 BX323845.3-201ENST00000428215 527 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 GAPDHP34-201ENST00000432112 823 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 DEFA9P-201ENST00000433042 285 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 PCBP2P1-201ENST00000437262 977 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 DNAJA1P5-201ENST00000440278 943 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.68□□□□□ -1.5
PKP4Q99569 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.68□□□□□ -1.5
PKP4Q99569 AL513343.1-201ENST00000451818 792 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC004129.2-201ENST00000457229 287 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC092905.1-201ENST00000467527 949 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC006539.1-201ENST00000481419 501 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC099521.1-201ENST00000482557 334 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 AC147055.1-201ENST00000509261 750 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 GAPDHP71-201ENST00000511530 1003 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 AC027026.1-201ENST00000532323 742 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.68□□□□□ -1.5
PKP4Q99569 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.68□□□□□ -1.5
PKP4Q99569 NPM1P42-201ENST00000560329 862 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.68□□□□□ -1.5
PKP4Q99569 AC079315.1-201ENST00000602952 623 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AC129778.1-202ENST00000623812 261 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 HPVC1-201ENST00000629899 1198 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AL591379.1-207ENST00000635982 261 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.68□□□□□ -1.5
PKP4Q99569 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 MFSD8-219ENST00000641228 2559 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 FBXL21-201ENST00000297158 1305 ntBASIC5.68□□□□□ -1.5
PKP4Q99569 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PKP4Q99569 PDZK1P1-202ENST00000425209 1350 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 AP002512.4-202ENST00000641599 4530 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AP004607.3-201ENST00000530354 3915 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PKP4Q99569 OR7E25P-201ENST00000344844 931 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 RNA5SP500-201ENST00000364486 119 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 RN7SKP78-201ENST00000364711 318 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AL353625.1-202ENST00000366273 571 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 MIR1203-201ENST00000408812 85 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 MRPL53P1-201ENST00000414323 319 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 MTND2P15-201ENST00000418575 892 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AC106901.1-201ENST00000425086 698 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 AC126120.1-201ENST00000431082 470 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 RPL12P16-201ENST00000431098 498 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AC015983.1-201ENST00000441577 373 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 RSU1P1-201ENST00000453416 441 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 FRG2FP-204ENST00000453982 852 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 RNU1-88P-201ENST00000459274 128 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.67□□□□□ -1.5
PKP4Q99569 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.67□□□□□ -1.5
PKP4Q99569 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.67□□□□□ -1.5
PKP4Q99569 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.67□□□□□ -1.5
PKP4Q99569 AL121594.2-201ENST00000541658 472 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.67□□□□□ -1.5
PKP4Q99569 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.67□□□□□ -1.5
PKP4Q99569 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.67□□□□□ -1.5
PKP4Q99569 AL138895.2-201ENST00000603019 178 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AC067773.1-201ENST00000603284 1094 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 FO681491.1-202ENST00000623392 737 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 AL590396.2-201ENST00000636511 1041 ntBASIC5.67□□□□□ -1.5
PKP4Q99569 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PKP4Q99569 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms