Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC105399.1-202ENST00000447303 205 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 RPS4XP1-201ENST00000482189 787 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC109464.1-201ENST00000511091 819 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC111000.6-201ENST00000514471 709 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 RNA5SP373-201ENST00000517271 95 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC022467.1-201ENST00000614738 749 ntBASIC7.9□□□□□ -1.14
SIN3AQ96ST3 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.14
SIN3AQ96ST3 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
SIN3AQ96ST3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.9□□□□□ -1.15
SIN3AQ96ST3 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC7.9□□□□□ -1.15
SIN3AQ96ST3 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 ATP5A1P1-201ENST00000454088 1321 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AL391361.1-201ENST00000405580 489 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 OR3A2-201ENST00000408891 1076 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 Z93019.1-201ENST00000416450 973 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 GSTM5P1-201ENST00000434751 660 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 OR2AF1P-201ENST00000454899 889 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 PGAM1P13-201ENST00000507497 754 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 RN7SKP99-201ENST00000517028 307 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AC108738.1-201ENST00000603703 237 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 MIR4302-201ENST00000638058 60 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AL022323.4-201ENST00000623980 13120 ntBASIC7.89□□□□□ -1.15
SIN3AQ96ST3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
SIN3AQ96ST3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 TEX41-206ENST00000432608 661 ntTSL 3 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 MTND2P40-201ENST00000436718 841 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC007386.1-201ENST00000455212 582 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 SIAH1P1-201ENST00000479411 923 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC108693.1-201ENST00000496068 432 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 MTND6P2-201ENST00000512226 524 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 ATP5LP3-201ENST00000514223 304 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 IGKV2-18-201ENST00000522607 343 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 OR4A17P-201ENST00000526032 904 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 OR8Q1P-201ENST00000526467 655 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 FKBP1AP1-201ENST00000594588 318 ntBASIC7.88□□□□□ -1.15
SIN3AQ96ST3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC7.88□□□□□ -1.15
SIN3AQ96ST3 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 DBIP1-201ENST00000401435 260 ntBASIC7.87□□□□□ -1.15
SIN3AQ96ST3 RN7SKP59-201ENST00000410520 314 ntBASIC7.87□□□□□ -1.15
SIN3AQ96ST3 BX276092.6-201ENST00000430476 250 ntBASIC7.87□□□□□ -1.15
SIN3AQ96ST3 MED28P3-201ENST00000444288 531 ntBASIC7.87□□□□□ -1.15
SIN3AQ96ST3 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.87□□□□□ -1.15
SIN3AQ96ST3 BX276092.8-201ENST00000455722 250 ntBASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms