Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 KYNUP3-201ENST00000574386 1341 ntBASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 PANDAR-201ENST00000629595 1506 ntBASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 CR1-204ENST00000367052 7469 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 CR1-205ENST00000367053 7469 ntTSL 5 BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
CDK5RAP2Q96SN8 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC007342.5-201ENST00000571340 2142 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RNA5SP443-201ENST00000363083 132 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RNA5SP487-201ENST00000410186 122 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 SLC35E1P1-201ENST00000419313 864 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 CRIP1P1-201ENST00000427567 185 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 Z80107.2-201ENST00000445127 392 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AL451063.1-201ENST00000450164 1133 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RPL7AP6-201ENST00000477943 801 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RN7SL30P-201ENST00000488416 306 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC093763.2-201ENST00000505334 1223 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RN7SL708P-201ENST00000580952 299 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AP001784.1-201ENST00000624107 428 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 SAMMSON-209ENST00000641222 1100 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC073429.2-201ENST00000569694 1444 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AL158152.1-201ENST00000602652 1435 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RN7SKP216-201ENST00000411050 312 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AL590399.2-201ENST00000427536 309 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC092647.2-201ENST00000452998 253 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 RN7SL447P-201ENST00000494711 245 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 MTND6P2-201ENST00000512226 524 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 SCARNA9-201ENST00000530422 353 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 OR4A6P-201ENST00000534364 970 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC122688.1-201ENST00000541494 223 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC090607.5-201ENST00000615692 224 ntBASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
CDK5RAP2Q96SN8 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
CDK5RAP2Q96SN8 RNU1-43P-201ENST00000365052 165 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AL645927.1-201ENST00000396783 406 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AC009804.1-201ENST00000400949 179 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 RPL7P45-201ENST00000455851 743 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 NDUFB5P1-201ENST00000508134 564 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 GTF2F2P1-201ENST00000511083 675 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AP004607.2-201ENST00000533949 322 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 AP004289.1-201ENST00000436307 2205 ntBASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CDK5RAP2Q96SN8 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.4□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms