Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AP003396.4-201ENST00000527574 265 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC068339.2-201ENST00000534395 618 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC008126.1-201ENST00000549019 480 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 MTATP6P2-201ENST00000603319 678 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AL021918.2-201ENST00000613415 194 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 MIR7109-201ENST00000613748 65 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC096708.4-201ENST00000620563 552 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC009269.6-201ENST00000621778 588 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 MSL3P1-202ENST00000440028 1468 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AC007159.1-201ENST00000566529 4706 ntBASIC6.71□□□□□ -1.34
CDK5RAP3Q96JB5 AL354854.1-201ENST00000455940 1363 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 FGG-205ENST00000407946 1636 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 COX6B1P3-201ENST00000312310 260 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AL672167.2-201ENST00000377164 879 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 MIR130B-202ENST00000385018 82 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC234781.4-201ENST00000419384 244 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 ATP5LP2-201ENST00000440646 311 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC104629.2-201ENST00000468627 598 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 PFN1P6-201ENST00000476786 399 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 OR4A6P-201ENST00000534364 970 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC026826.3-201ENST00000561747 158 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC097504.2-201ENST00000608088 454 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC245014.3-201ENST00000618589 347 ntBASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CDK5RAP3Q96JB5 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC026523.2-201ENST00000625039 7739 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RNA5SP211-201ENST00000365516 117 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RNU6-650P-201ENST00000365658 111 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 GNG5P2-201ENST00000372054 207 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 SNORA70.9-201ENST00000384370 135 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RPL23AP18-201ENST00000416139 468 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC245884.2-201ENST00000426257 404 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 UBE2D3P3-201ENST00000426992 425 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RPSAP40-201ENST00000442343 891 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 RPS7P3-201ENST00000443360 580 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC005077.1-201ENST00000449226 375 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 ATP5G1P3-201ENST00000463301 410 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC023194.2-201ENST00000465398 406 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC023245.1-201ENST00000468501 517 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 STRADBP1-201ENST00000478954 1281 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 TRBV5-2-201ENST00000489095 273 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 MTCO2P9-201ENST00000503214 694 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 OSBPL9P3-201ENST00000534523 595 ntBASIC6.69□□□□□ -1.34
CDK5RAP3Q96JB5 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms