Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 OR5D2P-201ENST00000524390 911 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 TRIM77BP-201ENST00000524985 1119 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AP004609.2-201ENST00000532177 190 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AP001267.4-201ENST00000602598 545 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC009237.12-201ENST00000604755 742 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 AC015922.4-201ENST00000612568 690 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 RBMY1HP-201ENST00000382759 1389 ntBASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
CHMP4CQ96CF2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL121977.1-201ENST00000401636 979 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RPL12P12-201ENST00000424633 501 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RPL12P11-201ENST00000439970 501 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL513321.1-201ENST00000441175 761 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TRIM60P16-201ENST00000444048 694 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 FTLP8-201ENST00000446770 267 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC094085.1-201ENST00000468914 584 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 CCDC11P1-201ENST00000503137 1162 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC025458.1-201ENST00000506046 166 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RFPL4AP3-201ENST00000515267 345 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP438-201ENST00000516561 112 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 HMGN2P47-201ENST00000559378 272 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AP005119.1-201ENST00000580956 292 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC119403.2-201ENST00000590960 598 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 MIR132-201ENST00000591554 101 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL139022.2-201ENST00000606934 443 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AC120053.1-201ENST00000607706 736 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL136520.1-201ENST00000600311 1322 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 AL592429.1-201ENST00000403909 1473 ntBASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC7.16□□□□□ -1.26
CHMP4CQ96CF2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP477-201ENST00000362639 119 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RNU6-1251P-201ENST00000364502 107 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RNA5SP510-201ENST00000364697 99 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RN7SKP15-201ENST00000364742 309 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RPL35AP31-201ENST00000418340 337 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RPS15AP30-201ENST00000420976 390 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 AC130360.1-201ENST00000425489 1117 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 RPL12P16-201ENST00000431098 498 ntBASIC7.15□□□□□ -1.26
CHMP4CQ96CF2 GXYLT1P1-201ENST00000446657 490 ntBASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms