Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 MIR6071-201ENST00000616741 78 ntBASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.7□□□□□ -1.66
RTN4IP1Q8WWV3 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 TMSB4XP2-201ENST00000335179 210 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 U3.7-201ENST00000363668 216 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 CXADRP1-201ENST00000398098 1095 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AL358178.1-201ENST00000407698 397 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 HYALP1-201ENST00000417674 1279 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AK4P4-201ENST00000419465 646 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 SUMO2P8-201ENST00000434672 286 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC073465.2-201ENST00000440938 498 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RPS10P18-201ENST00000442662 495 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RN7SL188P-201ENST00000469842 285 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC074255.1-201ENST00000511259 501 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RN7SKP70-201ENST00000516655 271 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 RNA5SP230-201ENST00000517039 122 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC060775.1-201ENST00000518241 520 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 HMGN2P36-201ENST00000529541 409 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AP000648.1-201ENST00000529682 397 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AGGF1P7-201ENST00000562369 913 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AL031601.1-201ENST00000605702 394 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 CXADRP3-202ENST00000617265 1100 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC068870.1-201ENST00000563737 2455 ntBASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.69□□□□□ -1.66
RTN4IP1Q8WWV3 OR9K1P-202ENST00000641111 3217 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC083899.1-201ENST00000454465 3819 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 OR7E156P-201ENST00000400303 464 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 MIR1203-201ENST00000408812 85 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 MRPL53P1-201ENST00000414323 319 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC066692.1-201ENST00000421721 457 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AL035660.1-201ENST00000422041 222 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 RPL12P24-201ENST00000474907 486 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC021193.1-201ENST00000511607 420 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 TRIM77BP-201ENST00000524985 1119 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC079064.1-201ENST00000528365 362 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 PMS2P3-207ENST00000529061 717 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AL359219.2-201ENST00000555184 348 ntBASIC4.68□□□□□ -1.66
RTN4IP1Q8WWV3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms