Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AP003033.2-201ENST00000528901 805 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC023161.2-201ENST00000551218 780 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC011611.5-201ENST00000552477 578 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL162632.2-201ENST00000553933 399 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RN7SL208P-201ENST00000577964 296 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC024589.2-201ENST00000605642 1294 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL445423.1-201ENST00000609941 536 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AP000255.1-201ENST00000610276 676 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC005277.2-201ENST00000617898 390 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AL354718.1-201ENST00000619764 589 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 AC089999.3-201ENST00000622440 577 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 MTHFD1P1-201ENST00000413059 2764 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 ZNF849P-201ENST00000594711 1566 ntBASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM48Q8IWZ4 IAPP-205ENST00000542023 2015 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL136531.3-201ENST00000624378 3658 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ABCA11P-202ENST00000504019 2110 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RNU6-236P-201ENST00000363886 106 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC245036.1-201ENST00000391727 309 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC233289.1-201ENST00000403700 508 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RPL26P37-201ENST00000411983 438 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RPL7AP51-201ENST00000422016 760 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL139184.1-202ENST00000422303 222 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 GTF2IP2-201ENST00000424290 697 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 MOB1AP1-201ENST00000430903 535 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 Z84478.1-201ENST00000438230 1219 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 MTND4P6-201ENST00000438297 472 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 HMGB3P6-201ENST00000444896 598 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 MRPL35P2-201ENST00000448009 511 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 CCNJP1-201ENST00000450600 1149 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC244505.3-201ENST00000454598 187 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RNU7-125P-201ENST00000458760 62 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RPL19P11-201ENST00000495944 589 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC093664.1-201ENST00000511779 289 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 RNU5A-4P-201ENST00000516588 111 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AP001000.1-201ENST00000526843 742 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 FXNP1-201ENST00000555153 337 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC007599.1-201ENST00000568688 1174 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AC106785.4-201ENST00000569492 412 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 AP003115.1-201ENST00000569849 463 ntBASIC6.43□□□□□ -1.38
TRIM48Q8IWZ4 MTND4LP24-201ENST00000572277 291 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms