Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 TMSB4XP4-201ENST00000323496 618 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 RN7SKP78-201ENST00000364711 318 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 RN7SKP292-201ENST00000365522 317 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 RN7SKP269-201ENST00000365545 319 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 RN7SKP29-201ENST00000410957 272 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CDY17P-201ENST00000414121 1282 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CRIP1P1-201ENST00000427567 185 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 BX119321.1-201ENST00000428912 797 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL161636.2-201ENST00000445179 927 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AC093166.4-201ENST00000457867 318 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 UBFD1P1-201ENST00000473259 814 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CYCSP22-201ENST00000517555 339 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AC090424.1-201ENST00000535243 736 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AL512356.3-201ENST00000623005 461 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 OR11H2-202ENST00000641517 1085 ntBASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RTL4Q6ZR62 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 MRPL53P1-201ENST00000414323 319 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 SDHDP6-201ENST00000414693 480 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 TRGV5P-201ENST00000419915 354 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 RPL34P3-201ENST00000421454 338 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC019205.1-201ENST00000421830 730 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC096775.1-201ENST00000437724 448 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 RPS12P17-201ENST00000438591 377 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 HMGN1P36-201ENST00000446623 298 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 FRG2FP-204ENST00000453982 852 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 RPL38P3-201ENST00000484463 213 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC112191.2-201ENST00000522428 333 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC012146.2-201ENST00000576545 416 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 HSPA8P14-201ENST00000552265 1805 ntBASIC5.36□□□□□ -1.55
RTL4Q6ZR62 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RTL4Q6ZR62 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 RNF19BPY-201ENST00000458209 1550 ntBASIC5.35□□□□□ -1.55
RTL4Q6ZR62 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.35□□□□□ -1.55
RTL4Q6ZR62 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RTL4Q6ZR62 RN7SKP69-201ENST00000365390 305 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms