Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC005632.2-201ENST00000564271 828 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 WBP1LP12-201ENST00000604449 331 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC011891.2-201ENST00000604949 397 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 RPSAP75-201ENST00000605848 301 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 MIR1264-201ENST00000616374 69 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 MIR6811-201ENST00000620409 58 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AP001284.1-201ENST00000528393 2118 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 AC005005.4-201ENST00000623789 16698 ntBASIC6.23□□□□□ -1.41
CCDC38Q502W7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.23□□□□□ -1.41
CCDC38Q502W7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CCDC38Q502W7 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AL161756.3-201ENST00000641216 2071 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RAD1P1-201ENST00000231383 813 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-609P-201ENST00000365459 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-729P-201ENST00000384399 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNA5SP187-201ENST00000384400 119 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-1320P-201ENST00000390838 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-1269P-201ENST00000391139 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU2-22P-201ENST00000411266 212 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RPS27AP6-201ENST00000427962 448 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC015983.1-201ENST00000441577 373 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 HIGD1AP16-201ENST00000450986 258 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 YRDCP3-201ENST00000456507 480 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-599P-201ENST00000459383 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-1193P-201ENST00000459461 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC078857.1-201ENST00000469870 667 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-1102P-201ENST00000516149 96 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC138832.1-201ENST00000522871 556 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC109635.6-201ENST00000525487 1113 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC006213.4-201ENST00000616184 634 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-368P-201ENST00000620928 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 RNU6-538P-201ENST00000622329 107 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC016583.1-201ENST00000624221 2431 ntBASIC6.22□□□□□ -1.41
CCDC38Q502W7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CCDC38Q502W7 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC38Q502W7 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC38Q502W7 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CCDC38Q502W7 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
CCDC38Q502W7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC6.21□□□□□ -1.41
CCDC38Q502W7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CCDC38Q502W7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CCDC38Q502W7 RNA5SP375-201ENST00000362975 119 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 RNU6-650P-201ENST00000365658 111 ntBASIC6.21□□□□□ -1.42
CCDC38Q502W7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms