Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL731566.1-201ENST00000620490 1937 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC092865.3-201ENST00000425390 1026 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL022324.2-201ENST00000434827 780 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC023141.3-201ENST00000436698 278 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 NANOGP9-201ENST00000439890 892 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC073909.1-201ENST00000447112 999 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL591363.1-201ENST00000450091 483 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 RPS7P10-201ENST00000464254 603 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC122714.1-201ENST00000502510 459 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 PMS2P3-207ENST00000529061 717 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC005244.1-201ENST00000582566 339 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 C17orf80-208ENST00000582793 531 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 MIR4260-201ENST00000583107 67 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC068768.2-201ENST00000602352 343 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 QRSL1P1-201ENST00000400977 1540 ntBASIC5.01□□□□□ -1.61
CCDC58Q4VC31 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC58Q4VC31 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC58Q4VC31 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC58Q4VC31 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC58Q4VC31 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC58Q4VC31 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC58Q4VC31 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 NIFKP3-201ENST00000417799 865 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5□□□□□ -1.61
CCDC58Q4VC31 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5□□□□□ -1.61
CCDC58Q4VC31 TMX2P1-201ENST00000436507 708 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC073465.2-201ENST00000440938 498 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC092601.1-201ENST00000444526 383 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 RN7SL570P-201ENST00000484405 292 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 CREM-238ENST00000488741 651 ntTSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 MTCO1P55-201ENST00000489829 745 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC093325.1-201ENST00000508378 326 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 RN7SKP253-201ENST00000516424 309 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC079064.1-201ENST00000528365 362 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5□□□□□ -1.61
CCDC58Q4VC31 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC092332.1-201ENST00000563684 829 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC007346.1-201ENST00000569208 867 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AP005119.1-201ENST00000580956 292 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC073333.2-201ENST00000603589 769 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 AC026367.3-201ENST00000619032 590 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 uc_338.7-201ENST00000621834 124 ntBASIC5□□□□□ -1.61
CCDC58Q4VC31 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC58Q4VC31 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5□□□□□ -1.61
CCDC58Q4VC31 AC000123.3-201ENST00000624029 4975 ntBASIC4.99□□□□□ -1.61
CCDC58Q4VC31 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC58Q4VC31 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms