Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.26□□□□□ -1.57
SCN1BQ07699 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.26□□□□□ -1.57
SCN1BQ07699 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SCN1BQ07699 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
SCN1BQ07699 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 RN7SKP166-201ENST00000410812 305 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 GABARAPL3-201ENST00000412799 354 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AL121878.1-201ENST00000418638 859 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 OR6K4P-201ENST00000423179 955 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 OSTCP4-201ENST00000424397 449 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC234771.2-201ENST00000445718 597 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 MORF4-201ENST00000447135 971 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AL157827.1-201ENST00000447622 132 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 RN7SL643P-201ENST00000471845 291 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 RPS4XP17-201ENST00000479057 754 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC011411.1-201ENST00000509592 876 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC093770.1-201ENST00000511559 571 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 RN7SKP288-201ENST00000516227 268 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC113191.1-201ENST00000517759 403 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.25□□□□□ -1.57
SCN1BQ07699 IGHV4-55-201ENST00000520889 368 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC078899.1-201ENST00000521432 1185 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC126615.2-201ENST00000553003 515 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AL161457.2-206ENST00000592778 802 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC006363.1-201ENST00000603806 463 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.25□□□□□ -1.57
SCN1BQ07699 FAM72A-208ENST00000607379 1139 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 U91328.4-201ENST00000608919 517 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC107308.1-201ENST00000615897 301 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC104307.1-201ENST00000616142 196 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC145207.9-201ENST00000623802 325 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 MFSD8-219ENST00000641228 2559 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.25□□□□□ -1.57
SCN1BQ07699 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.25□□□□□ -1.57
SCN1BQ07699 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SCN1BQ07699 AC092376.2-201ENST00000622621 4116 ntBASIC5.25□□□□□ -1.57
SCN1BQ07699 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.24□□□□□ -1.57
SCN1BQ07699 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 DDX6P1-205ENST00000441966 1436 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.24□□□□□ -1.57
SCN1BQ07699 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SCN1BQ07699 RPL11P4-201ENST00000332269 436 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
SCN1BQ07699 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SCN1BQ07699 SNORA70.6-201ENST00000383934 134 ntBASIC5.24□□□□□ -1.57
SCN1BQ07699 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms