Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL365220.1-201ENST00000432923 399 ntBASIC5.46□□□□□ -1.54
LTBQ06643 MTND2P2-201ENST00000434633 945 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 AC009963.4-201ENST00000448535 339 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AC098826.2-201ENST00000452011 651 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AL356390.1-201ENST00000455684 397 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.46□□□□□ -1.54
LTBQ06643 OR7E99P-201ENST00000505750 922 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 CR383658.1-201ENST00000514609 734 ntBASIC5.46□□□□□ -1.54
LTBQ06643 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 MRPS21P8-201ENST00000569196 235 ntBASIC5.46□□□□□ -1.54
LTBQ06643 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.46□□□□□ -1.54
LTBQ06643 ABI1P1-201ENST00000603375 1120 ntBASIC5.46□□□□□ -1.54
LTBQ06643 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.46□□□□□ -1.54
LTBQ06643 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.46□□□□□ -1.54
LTBQ06643 AC117490.2-201ENST00000610042 594 ntBASIC5.46□□□□□ -1.54
LTBQ06643 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 OR4G3P-201ENST00000633500 913 ntBASIC5.46□□□□□ -1.54
LTBQ06643 AC015799.1-201ENST00000622996 3122 ntBASIC5.46□□□□□ -1.54
LTBQ06643 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.46□□□□□ -1.54
LTBQ06643 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
LTBQ06643 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.46□□□□□ -1.54
LTBQ06643 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
LTBQ06643 ABCA11P-202ENST00000504019 2110 ntBASIC5.45□□□□□ -1.54
LTBQ06643 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 AL589655.1-201ENST00000405398 482 ntBASIC5.45□□□□□ -1.54
LTBQ06643 RNA5SP156-201ENST00000410250 110 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 VN1R37P-201ENST00000419096 748 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 ATP5LP2-201ENST00000440646 311 ntBASIC5.45□□□□□ -1.54
LTBQ06643 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
LTBQ06643 AC002553.3-201ENST00000453002 341 ntBASIC5.45□□□□□ -1.54
LTBQ06643 SDC4P-201ENST00000453285 601 ntBASIC5.45□□□□□ -1.54
LTBQ06643 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 AC023141.9-201ENST00000458734 412 ntBASIC5.45□□□□□ -1.54
LTBQ06643 ACA64.1-201ENST00000459171 127 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AC098847.1-201ENST00000473094 348 ntBASIC5.45□□□□□ -1.54
LTBQ06643 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 AL136038.1-201ENST00000497246 351 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AC090058.1-201ENST00000498788 435 ntBASIC5.45□□□□□ -1.54
LTBQ06643 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 CCDC11P1-201ENST00000503137 1162 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 AC106785.3-201ENST00000564064 847 ntBASIC5.45□□□□□ -1.54
LTBQ06643 LINC00556-201ENST00000569603 412 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AC008507.2-201ENST00000588402 1176 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AC006116.5-201ENST00000591936 559 ntBASIC5.45□□□□□ -1.54
LTBQ06643 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 AC087468.1-201ENST00000604365 630 ntBASIC5.45□□□□□ -1.54
LTBQ06643 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.45□□□□□ -1.54
LTBQ06643 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 uc_338.26-201ENST00000612659 160 ntBASIC5.45□□□□□ -1.54
LTBQ06643 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.45□□□□□ -1.54
LTBQ06643 AL357562.1-201ENST00000624911 609 ntBASIC5.45□□□□□ -1.54
LTBQ06643 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.45□□□□□ -1.54
LTBQ06643 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 AC027575.3-201ENST00000583058 2747 ntBASIC5.45□□□□□ -1.54
LTBQ06643 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
LTBQ06643 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms