Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 MTND2P3-201ENST00000452458 470 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 RN7SL72P-201ENST00000460697 269 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 RPS23P2-201ENST00000463671 415 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK3Q00526 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 MTND2P31-201ENST00000512602 616 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK3Q00526 RN7SKP248-201ENST00000516278 305 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK3Q00526 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK3Q00526 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.5
CDK3Q00526 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.65□□□□□ -1.5
CDK3Q00526 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK3Q00526 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDK3Q00526 FO393422.1-201ENST00000603908 708 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 AC104695.2-201ENST00000605056 775 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 KATNBL1P1-201ENST00000605192 748 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 CU639417.4-201ENST00000623928 207 ntBASIC5.65□□□□□ -1.5
CDK3Q00526 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.65□□□□□ -1.5
CDK3Q00526 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 YES1P1-201ENST00000418510 1628 ntBASIC5.65□□□□□ -1.51
CDK3Q00526 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.65□□□□□ -1.51
CDK3Q00526 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.65□□□□□ -1.51
CDK3Q00526 TTC41P-205ENST00000551270 3963 ntBASIC5.65□□□□□ -1.51
CDK3Q00526 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.65□□□□□ -1.51
CDK3Q00526 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.65□□□□□ -1.51
CDK3Q00526 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
CDK3Q00526 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDK3Q00526 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CDK3Q00526 RNA5SP131-201ENST00000365452 119 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 RNA5SP30-201ENST00000365552 115 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK3Q00526 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 VN1R21P-201ENST00000426703 765 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 CRIP1P1-201ENST00000427567 185 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.64□□□□□ -1.51
CDK3Q00526 TPRKBP1-201ENST00000456243 481 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 DUTP1-201ENST00000493631 470 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 RPS26P24-201ENST00000497656 331 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 AP002981.1-201ENST00000517692 975 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.64□□□□□ -1.51
CDK3Q00526 MIR6768-201ENST00000610734 72 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AC008115.3-201ENST00000614874 549 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AL691477.1-201ENST00000624398 162 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AC063952.1-203ENST00000634410 658 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 AL049767.1-202ENST00000637826 242 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
CDK3Q00526 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 AC114786.1-201ENST00000512892 1415 ntBASIC5.64□□□□□ -1.51
CDK3Q00526 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDK3Q00526 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.64□□□□□ -1.51
CDK3Q00526 LINC02019-201ENST00000608605 2060 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.63□□□□□ -1.51
CDK3Q00526 AC005225.5-201ENST00000623547 2225 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDK3Q00526 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 AL034546.1-201ENST00000623740 3693 ntBASIC5.63□□□□□ -1.51
CDK3Q00526 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDK3Q00526 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms