Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 AC079080.1-201ENST00000479841 822 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 RPSAP50-201ENST00000481955 852 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.37
CCNA1P78396 RNU6-1334P-201ENST00000516032 105 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AC022832.1-201ENST00000530718 645 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 AC090424.1-201ENST00000535243 736 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 AC116651.1-201ENST00000609724 556 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 AL139407.1-201ENST00000613826 1175 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC6.47□□□□□ -1.37
CCNA1P78396 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCNA1P78396 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCNA1P78396 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
CCNA1P78396 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCNA1P78396 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.46□□□□□ -1.37
CCNA1P78396 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CCNA1P78396 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
CCNA1P78396 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.46□□□□□ -1.37
CCNA1P78396 AC114876.1-201ENST00000490962 1366 ntBASIC6.46□□□□□ -1.37
CCNA1P78396 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.37
CCNA1P78396 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.46□□□□□ -1.37
CCNA1P78396 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCNA1P78396 AL138820.1-201ENST00000617901 5305 ntBASIC6.46□□□□□ -1.37
CCNA1P78396 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
CCNA1P78396 RN7SKP6-201ENST00000364795 319 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 MIR130A-201ENST00000385274 89 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 AL390774.1-201ENST00000411924 246 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNA1P78396 VN1R21P-201ENST00000426703 765 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNA1P78396 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNA1P78396 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNA1P78396 ZNF733P-202ENST00000444809 1573 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 FAR2P1-206ENST00000449736 709 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 MEMO1P4-201ENST00000453590 386 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNA1P78396 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC6.46□□□□□ -1.38
CCNA1P78396 AC022034.1-201ENST00000512867 2156 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 OR4A46P-201ENST00000527255 933 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.46□□□□□ -1.38
CCNA1P78396 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNA1P78396 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.46□□□□□ -1.38
CCNA1P78396 AL583832.1-201ENST00000603227 784 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 AL118522.2-201ENST00000616045 615 ntBASIC6.46□□□□□ -1.38
CCNA1P78396 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.46□□□□□ -1.38
CCNA1P78396 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CCNA1P78396 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.46□□□□□ -1.38
CCNA1P78396 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CCNA1P78396 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.45□□□□□ -1.38
CCNA1P78396 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
CCNA1P78396 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
CCNA1P78396 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNA1P78396 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CCNA1P78396 RNA5SP443-201ENST00000363083 132 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 RN7SKP125-201ENST00000410481 302 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC6.45□□□□□ -1.38
CCNA1P78396 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.45□□□□□ -1.38
CCNA1P78396 OR52B5P-201ENST00000435337 951 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 CEACAMP7-201ENST00000444105 496 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 OTX2P1-201ENST00000450956 354 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 RN7SL222P-201ENST00000476452 299 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC6.45□□□□□ -1.38
CCNA1P78396 AL035690.1-201ENST00000490892 383 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.45□□□□□ -1.38
CCNA1P78396 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC6.45□□□□□ -1.38
CCNA1P78396 MIR4311-201ENST00000580794 100 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.45□□□□□ -1.38
CCNA1P78396 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNA1P78396 AC000068.2-201ENST00000608816 460 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC239803.2-201ENST00000610161 430 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNA1P78396 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.45□□□□□ -1.38
CCNA1P78396 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.45□□□□□ -1.38
CCNA1P78396 OR52B5P-202ENST00000641118 1110 ntBASIC6.45□□□□□ -1.38
CCNA1P78396 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.45□□□□□ -1.38
CCNA1P78396 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CCNA1P78396 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms