Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 MIR4472-2-201ENST00000582069 67 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AC090774.2-201ENST00000584708 322 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AC063977.5-201ENST00000601044 974 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AL365181.4-201ENST00000609800 547 ntBASIC3.81□□□□□ -1.8
RPL39P62891 MIR6793-201ENST00000612376 63 ntBASIC3.81□□□□□ -1.8
RPL39P62891 5S_rRNA.29-201ENST00000641250 107 ntBASIC3.81□□□□□ -1.8
RPL39P62891 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 SMG1P7-201ENST00000565246 2704 ntBASIC3.81□□□□□ -1.8
RPL39P62891 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RPL39P62891 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 AC100778.3-201ENST00000580060 1750 ntBASIC3.81□□□□□ -1.8
RPL39P62891 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPL39P62891 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
RPL39P62891 AC079298.1-201ENST00000625026 1619 ntBASIC3.81□□□□□ -1.8
RPL39P62891 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 LINC02019-201ENST00000608605 2060 ntBASIC3.8□□□□□ -1.8
RPL39P62891 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC3.8□□□□□ -1.8
RPL39P62891 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RPL39P62891 HSPA8P14-201ENST00000552265 1805 ntBASIC3.8□□□□□ -1.8
RPL39P62891 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 OR9G4-201ENST00000302957 984 ntBASIC3.8□□□□□ -1.8
RPL39P62891 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 ATP5LP2-201ENST00000440646 311 ntBASIC3.8□□□□□ -1.8
RPL39P62891 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC3.8□□□□□ -1.8
RPL39P62891 CFL1P4-201ENST00000451536 498 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC004890.1-201ENST00000461005 181 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC069304.1-201ENST00000491593 704 ntBASIC3.8□□□□□ -1.8
RPL39P62891 RN7SL193P-201ENST00000491708 276 ntBASIC3.8□□□□□ -1.8
RPL39P62891 RN7SL362P-201ENST00000494228 267 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC112484.3-201ENST00000505910 329 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC026782.2-201ENST00000510845 636 ntBASIC3.8□□□□□ -1.8
RPL39P62891 RAD21-204ENST00000518055 896 ntTSL 2 BASIC3.8□□□□□ -1.8
RPL39P62891 IGKV3D-25-201ENST00000519599 235 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC3.8□□□□□ -1.8
RPL39P62891 CETN3-206ENST00000522864 738 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
RPL39P62891 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 CLMN-206ENST00000556441 452 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 AC091132.1-201ENST00000588189 547 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.8□□□□□ -1.8
RPL39P62891 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 AC092266.1-201ENST00000610958 165 ntBASIC3.8□□□□□ -1.8
RPL39P62891 MIR6883-201ENST00000614952 78 ntBASIC3.8□□□□□ -1.8
RPL39P62891 AC025574.2-201ENST00000615621 514 ntBASIC3.8□□□□□ -1.8
RPL39P62891 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
RPL39P62891 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 AC063976.2-201ENST00000425667 3556 ntBASIC3.8□□□□□ -1.8
RPL39P62891 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
RPL39P62891 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPL39P62891 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
RPL39P62891 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 CASC19-248ENST00000641674 1356 ntBASIC3.79□□□□□ -1.8
RPL39P62891 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPL39P62891 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPL39P62891 AL603750.1-201ENST00000624216 1717 ntBASIC3.79□□□□□ -1.8
RPL39P62891 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.79□□□□□ -1.8
RPL39P62891 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 RNU1-19P-201ENST00000363306 165 ntBASIC3.79□□□□□ -1.8
RPL39P62891 RNA5SP279-201ENST00000365513 117 ntBASIC3.79□□□□□ -1.8
RPL39P62891 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPL39P62891 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.79□□□□□ -1.8
RPL39P62891 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 AK4P4-201ENST00000419465 646 ntBASIC3.79□□□□□ -1.8
RPL39P62891 AKR1B10P1-201ENST00000425765 942 ntBASIC3.79□□□□□ -1.8
RPL39P62891 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC3.79□□□□□ -1.8
RPL39P62891 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
RPL39P62891 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC3.79□□□□□ -1.8
RPL39P62891 RPL5P7-201ENST00000444235 813 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms