Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AP001284.1-201ENST00000528393 2118 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AL121594.2-201ENST00000541658 472 ntBASIC5.34□□□□□ -1.55
CDH11P55287 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 AC084824.2-201ENST00000548906 345 ntBASIC5.34□□□□□ -1.55
CDH11P55287 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 AC007956.1-201ENST00000555623 542 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH11P55287 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 FAM60CP-201ENST00000591086 664 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AL109620.1-201ENST00000618738 1197 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC096708.4-201ENST00000620563 552 ntBASIC5.34□□□□□ -1.55
CDH11P55287 AC024884.1-201ENST00000620583 399 ntBASIC5.34□□□□□ -1.55
CDH11P55287 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 AC091948.2-201ENST00000636510 279 ntBASIC5.34□□□□□ -1.55
CDH11P55287 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CDH11P55287 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH11P55287 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CDH11P55287 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CDH11P55287 AC008627.1-201ENST00000517511 1704 ntBASIC5.34□□□□□ -1.56
CDH11P55287 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 AC022325.1-201ENST00000502748 2199 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 CUL4AP1-201ENST00000514750 1863 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AC119674.1-202ENST00000641333 1860 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 AC023490.2-201ENST00000359859 470 ntBASIC5.33□□□□□ -1.56
CDH11P55287 RNA5SP435-201ENST00000364044 108 ntBASIC5.33□□□□□ -1.56
CDH11P55287 RN7SKP269-201ENST00000365545 319 ntBASIC5.33□□□□□ -1.56
CDH11P55287 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 AC087752.1-201ENST00000391360 558 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AC092642.1-201ENST00000392417 425 ntBASIC5.33□□□□□ -1.56
CDH11P55287 PEX12P1-201ENST00000400284 1048 ntBASIC5.33□□□□□ -1.56
CDH11P55287 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 AL139039.2-201ENST00000407436 479 ntBASIC5.33□□□□□ -1.56
CDH11P55287 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 RPL12P12-201ENST00000424633 501 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AL590623.1-201ENST00000427864 105 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 HLA-DPA3-207ENST00000454398 229 ntBASIC5.33□□□□□ -1.56
CDH11P55287 ACA64.1-201ENST00000459171 127 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AC108751.3-201ENST00000461814 1020 ntBASIC5.33□□□□□ -1.56
CDH11P55287 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
CDH11P55287 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 GLUD1P3-202ENST00000508551 200 ntBASIC5.33□□□□□ -1.56
CDH11P55287 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.33□□□□□ -1.56
CDH11P55287 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 TRIM77BP-201ENST00000524985 1119 ntBASIC5.33□□□□□ -1.56
CDH11P55287 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 MTND2P17-201ENST00000550281 688 ntBASIC5.33□□□□□ -1.56
CDH11P55287 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.33□□□□□ -1.56
CDH11P55287 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 AL049840.6-201ENST00000604583 345 ntBASIC5.33□□□□□ -1.56
CDH11P55287 AC108865.2-201ENST00000606881 432 ntBASIC5.33□□□□□ -1.56
CDH11P55287 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
CDH11P55287 AC011933.2-201ENST00000578539 2790 ntBASIC5.33□□□□□ -1.56
CDH11P55287 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDH11P55287 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.33□□□□□ -1.56
CDH11P55287 AL022311.1-201ENST00000623726 19416 ntBASIC5.32□□□□□ -1.56
CDH11P55287 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.32□□□□□ -1.56
CDH11P55287 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CDH11P55287 SUGT1P2-201ENST00000379452 992 ntBASIC5.32□□□□□ -1.56
CDH11P55287 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDH11P55287 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.32□□□□□ -1.56
CDH11P55287 AC066692.1-201ENST00000421721 457 ntBASIC5.32□□□□□ -1.56
CDH11P55287 RCC2P2-201ENST00000422174 918 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AL354766.1-201ENST00000423396 542 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC099677.3-201ENST00000427081 395 ntBASIC5.32□□□□□ -1.56
CDH11P55287 AC138761.5-201ENST00000433967 325 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms