Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH6P55285 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 CASC19-260ENST00000641828 2001 ntBASIC5.79□□□□□ -1.48
CDH6P55285 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH6P55285 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 AC092681.1-201ENST00000297369 291 ntBASIC5.79□□□□□ -1.48
CDH6P55285 RNA5SP131-201ENST00000365452 119 ntBASIC5.79□□□□□ -1.48
CDH6P55285 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
CDH6P55285 U3.23-201ENST00000391132 200 ntBASIC5.79□□□□□ -1.48
CDH6P55285 RPSAP35-201ENST00000413753 818 ntBASIC5.79□□□□□ -1.48
CDH6P55285 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 AC090589.1-201ENST00000473109 362 ntBASIC5.79□□□□□ -1.48
CDH6P55285 SNRPCP3-201ENST00000474888 476 ntBASIC5.79□□□□□ -1.48
CDH6P55285 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 RPS26P24-201ENST00000497656 331 ntBASIC5.79□□□□□ -1.48
CDH6P55285 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 AC093815.1-201ENST00000508637 280 ntBASIC5.79□□□□□ -1.48
CDH6P55285 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 ASNSP4-201ENST00000511103 447 ntBASIC5.79□□□□□ -1.48
CDH6P55285 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 OR4A17P-201ENST00000526032 904 ntBASIC5.79□□□□□ -1.48
CDH6P55285 AP001284.1-201ENST00000528393 2118 ntBASIC5.79□□□□□ -1.48
CDH6P55285 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH6P55285 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH6P55285 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 H3F3BP2-201ENST00000583907 357 ntBASIC5.79□□□□□ -1.48
CDH6P55285 MIR6133-201ENST00000617057 108 ntBASIC5.79□□□□□ -1.48
CDH6P55285 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.79□□□□□ -1.48
CDH6P55285 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.79□□□□□ -1.48
CDH6P55285 AC015689.2-201ENST00000528172 1738 ntBASIC5.79□□□□□ -1.48
CDH6P55285 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.79□□□□□ -1.48
CDH6P55285 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.79□□□□□ -1.48
CDH6P55285 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
CDH6P55285 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH6P55285 OR13C1P-202ENST00000641378 2919 ntBASIC5.78□□□□□ -1.48
CDH6P55285 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 GVINP1-202ENST00000531871 7271 ntBASIC5.78□□□□□ -1.48
CDH6P55285 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 SNORA70.6-201ENST00000383934 134 ntBASIC5.78□□□□□ -1.48
CDH6P55285 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH6P55285 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CDH6P55285 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 AL133482.1-201ENST00000415988 498 ntBASIC5.78□□□□□ -1.48
CDH6P55285 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 RPL34P3-201ENST00000421454 338 ntBASIC5.78□□□□□ -1.48
CDH6P55285 IPPKP1-201ENST00000422501 768 ntBASIC5.78□□□□□ -1.48
CDH6P55285 RIMKLBP2-201ENST00000424737 654 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC113412.1-201ENST00000425840 504 ntBASIC5.78□□□□□ -1.48
CDH6P55285 RPL7P56-201ENST00000429441 717 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC002069.1-201ENST00000429649 1159 ntBASIC5.78□□□□□ -1.48
CDH6P55285 IGBP1P3-201ENST00000447449 1000 ntBASIC5.78□□□□□ -1.48
CDH6P55285 LRRC37A14P-201ENST00000452297 462 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AP000547.1-201ENST00000454360 617 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AZGP1P2-201ENST00000454506 345 ntBASIC5.78□□□□□ -1.48
CDH6P55285 RN7SL188P-201ENST00000469842 285 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC007998.1-201ENST00000474156 672 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 SNORA43.3-201ENST00000517240 103 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CDH6P55285 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.78□□□□□ -1.48
CDH6P55285 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.78□□□□□ -1.48
CDH6P55285 TRIM51DP-201ENST00000529746 596 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AP004609.2-201ENST00000532177 190 ntBASIC5.78□□□□□ -1.48
CDH6P55285 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.78□□□□□ -1.48
CDH6P55285 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.78□□□□□ -1.48
CDH6P55285 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms