Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
EPHB3P54753 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
EPHB3P54753 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
EPHB3P54753 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
EPHB3P54753 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 SALL4P7-201ENST00000555779 3120 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
EPHB3P54753 AC062022.1-201ENST00000451026 1684 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 THAP12P8-201ENST00000447914 2115 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 ECM1P2-201ENST00000503354 1577 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
EPHB3P54753 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
EPHB3P54753 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 AL117339.4-201ENST00000608335 7063 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
EPHB3P54753 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
EPHB3P54753 Y_RNA.77-201ENST00000362962 107 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 AC008171.1-201ENST00000395058 200 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 RPS3AP26-201ENST00000398259 784 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 RNU4-22P-201ENST00000411058 166 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 ARL2BPP3-201ENST00000421226 480 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 AC110602.1-201ENST00000437414 318 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AMYP1-201ENST00000440059 1023 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 AL353572.1-201ENST00000442490 417 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL929288.2-201ENST00000446368 407 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 CEACAMP5-201ENST00000448037 961 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 RPS27AP8-201ENST00000452665 445 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 AL139156.3-201ENST00000454802 394 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 NDUFA12P1-201ENST00000455914 406 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 RPL12P30-201ENST00000488389 499 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.74□□□□□ -1.33
EPHB3P54753 OR9N1P-202ENST00000494289 481 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 RN7SL104P-201ENST00000498686 293 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 KHDC1P1-201ENST00000511053 508 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 RNA5SP206-201ENST00000516703 121 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 IGHV4-55-201ENST00000520889 368 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AC022880.1-201ENST00000534017 973 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 ZNF415P1-201ENST00000582279 1166 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AC090616.1-201ENST00000583895 447 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 PART1_2.1-201ENST00000612397 250 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL445649.1-201ENST00000615941 691 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AC121761.2-201ENST00000617300 689 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL158163.2-201ENST00000619110 700 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL158062.1-201ENST00000619632 745 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AL359740.1-201ENST00000624340 592 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 AP003072.4-201ENST00000624580 310 ntBASIC6.74□□□□□ -1.33
EPHB3P54753 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
EPHB3P54753 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
EPHB3P54753 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
EPHB3P54753 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 CACNB4-254ENST00000637514 1880 ntTSL 5 BASIC6.74□□□□□ -1.33
EPHB3P54753 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC6.74□□□□□ -1.33
EPHB3P54753 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.74□□□□□ -1.33
EPHB3P54753 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.74□□□□□ -1.33
EPHB3P54753 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
EPHB3P54753 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 AL596244.1-201ENST00000567068 3779 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.73□□□□□ -1.33
EPHB3P54753 AC083806.2-201ENST00000617795 2685 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
EPHB3P54753 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.73□□□□□ -1.33
EPHB3P54753 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
EPHB3P54753 RNU4-68P-201ENST00000364314 141 ntBASIC6.73□□□□□ -1.33
EPHB3P54753 RNU4-75P-201ENST00000364621 146 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms