Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.72□□□□□ -1.17
CLTCL1P53675 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
CLTCL1P53675 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLTCL1P53675 AL158152.1-201ENST00000602652 1435 ntBASIC7.72□□□□□ -1.17
CLTCL1P53675 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
CLTCL1P53675 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC7.72□□□□□ -1.17
CLTCL1P53675 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC7.72□□□□□ -1.17
CLTCL1P53675 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLTCL1P53675 U3.3-201ENST00000362986 216 ntBASIC7.72□□□□□ -1.17
CLTCL1P53675 RNVU1-6-201ENST00000364688 164 ntBASIC7.72□□□□□ -1.17
CLTCL1P53675 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLTCL1P53675 AC092490.3-201ENST00000545370 572 ntBASIC7.72□□□□□ -1.17
CLTCL1P53675 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC7.72□□□□□ -1.17
CLTCL1P53675 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC7.72□□□□□ -1.17
CLTCL1P53675 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC7.72□□□□□ -1.17
CLTCL1P53675 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
CLTCL1P53675 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.72□□□□□ -1.17
CLTCL1P53675 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
CLTCL1P53675 DMD-222ENST00000474231 5209 ntTSL 5 BASIC7.72□□□□□ -1.17
CLTCL1P53675 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
CLTCL1P53675 RN7SKP95-201ENST00000362860 303 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.71□□□□□ -1.17
CLTCL1P53675 RPA2P2-201ENST00000419698 796 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 DDX39BP1-205ENST00000422507 192 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC7.71□□□□□ -1.17
CLTCL1P53675 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC7.71□□□□□ -1.17
CLTCL1P53675 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC7.71□□□□□ -1.17
CLTCL1P53675 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC7.71□□□□□ -1.17
CLTCL1P53675 GAPDHP62-201ENST00000515313 990 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 RN7SKP66-201ENST00000516681 231 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.71□□□□□ -1.17
CLTCL1P53675 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC7.71□□□□□ -1.17
CLTCL1P53675 MIR6820-201ENST00000611508 62 ntBASIC7.71□□□□□ -1.17
CLTCL1P53675 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
CLTCL1P53675 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
CLTCL1P53675 UGT2B24P-201ENST00000514441 1597 ntBASIC7.71□□□□□ -1.18
CLTCL1P53675 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC7.71□□□□□ -1.18
CLTCL1P53675 AC073365.1-203ENST00000641055 1992 ntBASIC7.71□□□□□ -1.18
CLTCL1P53675 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC7.71□□□□□ -1.18
CLTCL1P53675 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLTCL1P53675 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLTCL1P53675 MAPK10-371ENST00000641952 5209 ntBASIC7.71□□□□□ -1.18
CLTCL1P53675 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLTCL1P53675 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
CLTCL1P53675 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
CLTCL1P53675 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
CLTCL1P53675 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC136624.1-201ENST00000400791 413 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC093655.2-201ENST00000425735 631 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 RPL7P56-201ENST00000429441 717 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 LINC02210-201ENST00000444561 288 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 RN7SL188P-201ENST00000469842 285 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC7.7□□□□□ -1.18
CLTCL1P53675 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC7.7□□□□□ -1.18
CLTCL1P53675 CASC19-281ENST00000642118 1554 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 AC114774.1-201ENST00000507410 1770 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AL359715.3-201ENST00000569267 2123 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 AC100757.1-201ENST00000616872 1835 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.7□□□□□ -1.18
CLTCL1P53675 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.7□□□□□ -1.18
CLTCL1P53675 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.7□□□□□ -1.18
CLTCL1P53675 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 GNG5P2-201ENST00000372054 207 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 RPL11P3-201ENST00000395256 523 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AL360081.1-201ENST00000428299 555 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 RPL34P20-201ENST00000442771 351 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 AC105233.1-201ENST00000498840 781 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 AC004980.4-201ENST00000513375 203 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 PRELID3BP3-201ENST00000584963 545 ntBASIC7.7□□□□□ -1.18
CLTCL1P53675 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.7□□□□□ -1.18
CLTCL1P53675 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
CLTCL1P53675 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC7.7□□□□□ -1.18
CLTCL1P53675 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
CLTCL1P53675 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.69□□□□□ -1.18
CLTCL1P53675 AP004289.1-201ENST00000436307 2205 ntBASIC7.69□□□□□ -1.18
CLTCL1P53675 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
CLTCL1P53675 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 KAT6B-204ENST00000372724 7106 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
CLTCL1P53675 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms