Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 Y_RNA.62-201ENST00000362840 99 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 RNA5SP507-201ENST00000363603 121 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AL121977.1-201ENST00000401636 979 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.91□□□□□ -1.46
LIMK1P53667 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC091685.2-201ENST00000454924 864 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AC108161.1-201ENST00000461060 402 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 SNRPCP3-201ENST00000474888 476 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 RN7SL57P-201ENST00000493687 290 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.91□□□□□ -1.46
LIMK1P53667 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 HMGN2P6-201ENST00000551091 273 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AC004825.1-201ENST00000555068 586 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AL121839.1-201ENST00000556233 1185 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.91□□□□□ -1.46
LIMK1P53667 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC067838.1-201ENST00000606064 577 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AL159169.2-201ENST00000610061 1269 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 MIR6837-201ENST00000620884 64 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 AL132640.3-201ENST00000630473 177 ntBASIC5.91□□□□□ -1.46
LIMK1P53667 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
LIMK1P53667 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
LIMK1P53667 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC5.91□□□□□ -1.46
LIMK1P53667 AC107021.2-201ENST00000567714 2095 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 AL353796.1-201ENST00000561542 3241 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 RLIMP2-201ENST00000427891 1563 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LIMK1P53667 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
LIMK1P53667 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
LIMK1P53667 RNU1-146P-201ENST00000364015 165 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-1320P-201ENST00000390838 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-1269P-201ENST00000391139 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 NPM1P37-201ENST00000403105 874 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RN7SKP279-201ENST00000411383 298 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMK1P53667 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMK1P53667 RBMY2KP-201ENST00000418221 992 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RPS17P17-201ENST00000419392 409 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.9□□□□□ -1.46
LIMK1P53667 KIF4CP-201ENST00000422742 1279 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 TNPO1P1-201ENST00000423641 1138 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AL662874.1-201ENST00000426065 230 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC009784.1-201ENST00000426484 460 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC126120.1-201ENST00000431082 470 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMK1P53667 AL772161.1-201ENST00000439130 476 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.9□□□□□ -1.46
LIMK1P53667 OR6C72P-201ENST00000451403 892 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-599P-201ENST00000459383 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 RNU6-1193P-201ENST00000459461 107 ntBASIC5.9□□□□□ -1.46
LIMK1P53667 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC5.9□□□□□ -1.46
LIMK1P53667 AC107015.1-201ENST00000466902 747 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms