Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 PCNPP1-201ENST00000552501 511 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 AC106730.2-201ENST00000566641 540 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.59□□□□□ -1.51
CXCL12P48061 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 AL353763.1-201ENST00000624467 1628 ntBASIC5.59□□□□□ -1.52
CXCL12P48061 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.59□□□□□ -1.52
CXCL12P48061 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CXCL12P48061 CASC19-281ENST00000642118 1554 ntBASIC5.59□□□□□ -1.52
CXCL12P48061 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
CXCL12P48061 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CXCL12P48061 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
CXCL12P48061 CASC19-243ENST00000641588 1546 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXCL12P48061 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.58□□□□□ -1.52
CXCL12P48061 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.58□□□□□ -1.52
CXCL12P48061 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 ZNF101P1-201ENST00000435701 1720 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 MIR133B-201ENST00000362210 119 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 RPS17P17-201ENST00000419392 409 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.58□□□□□ -1.52
CXCL12P48061 HMGB1P32-201ENST00000425971 565 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.58□□□□□ -1.52
CXCL12P48061 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.58□□□□□ -1.52
CXCL12P48061 RPL21P133-201ENST00000443666 476 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC5.58□□□□□ -1.52
CXCL12P48061 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC5.58□□□□□ -1.52
CXCL12P48061 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.58□□□□□ -1.52
CXCL12P48061 OR51K1P-201ENST00000510214 950 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.58□□□□□ -1.52
CXCL12P48061 IGLV3-24-201ENST00000517477 197 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AL121594.2-201ENST00000541658 472 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AC114947.2-201ENST00000565748 2125 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.58□□□□□ -1.52
CXCL12P48061 MIR3934-201ENST00000579806 107 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXCL12P48061 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
CXCL12P48061 AC011497.2-201ENST00000600255 639 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 AC069307.1-201ENST00000602820 447 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.58□□□□□ -1.52
CXCL12P48061 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 AC105105.5-201ENST00000622635 1294 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.58□□□□□ -1.52
CXCL12P48061 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.58□□□□□ -1.52
CXCL12P48061 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.58□□□□□ -1.52
CXCL12P48061 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
CXCL12P48061 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CXCL12P48061 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CXCL12P48061 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.58□□□□□ -1.52
CXCL12P48061 AL031123.3-201ENST00000623345 1837 ntBASIC5.58□□□□□ -1.52
CXCL12P48061 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 CHMP1B2P-201ENST00000399581 597 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AL009179.1-201ENST00000406085 265 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.57□□□□□ -1.52
CXCL12P48061 AL807761.1-201ENST00000417622 171 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC007568.1-201ENST00000422912 471 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 VN1R21P-201ENST00000426703 765 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CXCL12P48061 AC073648.4-201ENST00000442655 781 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 CEACAMP9-201ENST00000442990 513 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC092647.3-201ENST00000443044 633 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AZGP1P2-201ENST00000454506 345 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.57□□□□□ -1.52
CXCL12P48061 BX284632.1-201ENST00000478218 541 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC093890.1-201ENST00000502554 540 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC5.57□□□□□ -1.52
CXCL12P48061 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.57□□□□□ -1.52
CXCL12P48061 AC013701.1-201ENST00000522657 465 ntBASIC5.57□□□□□ -1.52
CXCL12P48061 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.57□□□□□ -1.52
CXCL12P48061 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
CXCL12P48061 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.57□□□□□ -1.52
CXCL12P48061 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 404.2 ms