Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
FDFT1P37268 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
FDFT1P37268 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 LINC01963-201ENST00000562038 3148 ntBASIC5.7□□□□□ -1.5
FDFT1P37268 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
FDFT1P37268 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
FDFT1P37268 ABCC13-202ENST00000463099 3842 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
FDFT1P37268 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 RNA5SP433-201ENST00000364491 114 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC009784.1-201ENST00000426484 460 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 HMGN2P27-201ENST00000427352 270 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.69□□□□□ -1.5
FDFT1P37268 TRIM77BP-201ENST00000524985 1119 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC079064.1-201ENST00000528365 362 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 HMGB1P42-201ENST00000532126 553 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 DPPA2P4-201ENST00000563717 878 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.69□□□□□ -1.5
FDFT1P37268 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 FO681491.1-202ENST00000623392 737 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC087565.3-203ENST00000641018 837 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 AC104964.3-201ENST00000606115 2860 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.69□□□□□ -1.5
FDFT1P37268 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
FDFT1P37268 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 AC018809.2-201ENST00000602436 3823 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 AC007842.1-201ENST00000597336 2039 ntBASIC5.69□□□□□ -1.5
FDFT1P37268 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
FDFT1P37268 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
FDFT1P37268 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
FDFT1P37268 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 RN7SKP275-201ENST00000364626 301 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 RPS3AP2-201ENST00000407190 754 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC117434.1-201ENST00000419971 836 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC066692.1-201ENST00000421721 457 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC007161.1-204ENST00000423039 460 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 AL136231.1-201ENST00000429407 730 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC006335.2-201ENST00000437993 330 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 AL358876.1-201ENST00000453364 1075 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 RPS23P6-201ENST00000466136 431 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.68□□□□□ -1.5
FDFT1P37268 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC5.68□□□□□ -1.5
FDFT1P37268 SEPT10P1-201ENST00000517342 1162 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 MRPS16P1-201ENST00000523462 412 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 TRIM51DP-201ENST00000529746 596 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.68□□□□□ -1.5
FDFT1P37268 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC015802.2-201ENST00000589690 189 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.68□□□□□ -1.5
FDFT1P37268 MIR6780B-201ENST00000610307 79 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AL162574.1-201ENST00000615702 950 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AC025262.3-201ENST00000623666 360 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
FDFT1P37268 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
FDFT1P37268 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
FDFT1P37268 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 AL359715.3-201ENST00000569267 2123 ntBASIC5.68□□□□□ -1.5
FDFT1P37268 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
FDFT1P37268 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.67□□□□□ -1.5
FDFT1P37268 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
FDFT1P37268 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms