Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.04□□□□□ -1.28
RFC4P35249 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
RFC4P35249 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.03□□□□□ -1.28
RFC4P35249 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.03□□□□□ -1.28
RFC4P35249 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.03□□□□□ -1.28
RFC4P35249 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC7.03□□□□□ -1.28
RFC4P35249 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 AL133388.1-201ENST00000404509 287 ntBASIC7.03□□□□□ -1.28
RFC4P35249 RPS17P17-201ENST00000419392 409 ntBASIC7.03□□□□□ -1.28
RFC4P35249 PRUNEP1-201ENST00000425846 705 ntBASIC7.03□□□□□ -1.28
RFC4P35249 AC092017.2-201ENST00000427600 362 ntBASIC7.03□□□□□ -1.28
RFC4P35249 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.03□□□□□ -1.28
RFC4P35249 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 AC092106.1-201ENST00000444291 373 ntBASIC7.03□□□□□ -1.28
RFC4P35249 AC007686.1-201ENST00000488511 463 ntBASIC7.03□□□□□ -1.28
RFC4P35249 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.03□□□□□ -1.28
RFC4P35249 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC7.03□□□□□ -1.28
RFC4P35249 RNU6-941P-201ENST00000516346 108 ntBASIC7.03□□□□□ -1.28
RFC4P35249 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.03□□□□□ -1.28
RFC4P35249 CLMN-206ENST00000556441 452 ntTSL 5 BASIC7.03□□□□□ -1.28
RFC4P35249 AL049779.3-201ENST00000557141 606 ntBASIC7.03□□□□□ -1.28
RFC4P35249 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC7.03□□□□□ -1.28
RFC4P35249 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC7.03□□□□□ -1.28
RFC4P35249 AC069307.1-201ENST00000602820 447 ntBASIC7.03□□□□□ -1.28
RFC4P35249 AC004836.1-201ENST00000623032 634 ntBASIC7.03□□□□□ -1.28
RFC4P35249 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RFC4P35249 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
RFC4P35249 CASC19-281ENST00000642118 1554 ntBASIC7.03□□□□□ -1.28
RFC4P35249 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.03□□□□□ -1.28
RFC4P35249 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RFC4P35249 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.02□□□□□ -1.28
RFC4P35249 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.28
RFC4P35249 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFC4P35249 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFC4P35249 AL731532.1-201ENST00000623972 4236 ntBASIC7.02□□□□□ -1.29
RFC4P35249 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFC4P35249 RNU1-149P-201ENST00000390870 161 ntBASIC7.02□□□□□ -1.29
RFC4P35249 AL035419.1-201ENST00000397037 564 ntBASIC7.02□□□□□ -1.29
RFC4P35249 RNU6ATAC7P-201ENST00000408111 127 ntBASIC7.02□□□□□ -1.29
RFC4P35249 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC7.02□□□□□ -1.29
RFC4P35249 AC093655.2-201ENST00000425735 631 ntBASIC7.02□□□□□ -1.29
RFC4P35249 HNRNPA3P4-201ENST00000427514 803 ntBASIC7.02□□□□□ -1.29
RFC4P35249 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC7.02□□□□□ -1.29
RFC4P35249 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.02□□□□□ -1.29
RFC4P35249 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.02□□□□□ -1.29
RFC4P35249 CT45A11P-201ENST00000448043 1134 ntBASIC7.02□□□□□ -1.29
RFC4P35249 MEMO1P4-201ENST00000453590 386 ntBASIC7.02□□□□□ -1.29
RFC4P35249 RPS29P22-201ENST00000472363 168 ntBASIC7.02□□□□□ -1.29
RFC4P35249 RPL7P6-201ENST00000480903 738 ntBASIC7.02□□□□□ -1.29
RFC4P35249 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC7.02□□□□□ -1.29
RFC4P35249 AL121594.2-201ENST00000541658 472 ntBASIC7.02□□□□□ -1.29
RFC4P35249 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.02□□□□□ -1.29
RFC4P35249 AC114947.2-201ENST00000565748 2125 ntBASIC7.02□□□□□ -1.29
RFC4P35249 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RFC4P35249 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RFC4P35249 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.02□□□□□ -1.29
RFC4P35249 AC060766.1-201ENST00000590824 627 ntBASIC7.02□□□□□ -1.29
RFC4P35249 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
RFC4P35249 AC109583.2-201ENST00000617367 129 ntBASIC7.02□□□□□ -1.29
RFC4P35249 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RFC4P35249 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
RFC4P35249 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
RFC4P35249 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RFC4P35249 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RFC4P35249 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.01□□□□□ -1.29
RFC4P35249 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RFC4P35249 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC7.01□□□□□ -1.29
RFC4P35249 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.01□□□□□ -1.29
RFC4P35249 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RFC4P35249 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC7.01□□□□□ -1.29
RFC4P35249 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 RNU4-4P-201ENST00000364588 130 ntBASIC7.01□□□□□ -1.29
RFC4P35249 SNORA16A-201ENST00000384342 137 ntBASIC7.01□□□□□ -1.29
RFC4P35249 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RFC4P35249 AL009179.1-201ENST00000406085 265 ntBASIC7.01□□□□□ -1.29
RFC4P35249 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC7.01□□□□□ -1.29
RFC4P35249 AC116036.1-201ENST00000412199 367 ntBASIC7.01□□□□□ -1.29
RFC4P35249 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC7.01□□□□□ -1.29
RFC4P35249 AL807761.1-201ENST00000417622 171 ntBASIC7.01□□□□□ -1.29
RFC4P35249 HMGB1P32-201ENST00000425971 565 ntBASIC7.01□□□□□ -1.29
RFC4P35249 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC7.01□□□□□ -1.29
RFC4P35249 AL049745.1-201ENST00000433953 286 ntBASIC7.01□□□□□ -1.29
RFC4P35249 RPS11P7-201ENST00000442125 465 ntBASIC7.01□□□□□ -1.29
RFC4P35249 AC092647.3-201ENST00000443044 633 ntBASIC7.01□□□□□ -1.29
RFC4P35249 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms