Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.38□□□□□ -1.39
HOXA13P31271 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 RNA5SP319-201ENST00000362768 119 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 RNU4-2-201ENST00000365668 141 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 AL451142.1-201ENST00000375867 775 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA13P31271 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA13P31271 RN7SKP248-201ENST00000516278 305 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC137627.1-201ENST00000545761 289 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA13P31271 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.38□□□□□ -1.39
HOXA13P31271 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.38□□□□□ -1.39
HOXA13P31271 AC009303.3-201ENST00000591103 736 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 FKBP1AP1-201ENST00000594588 318 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 AC063952.1-203ENST00000634410 658 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 AC144833.1-201ENST00000567953 4089 ntBASIC6.38□□□□□ -1.39
HOXA13P31271 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HOXA13P31271 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.38□□□□□ -1.39
HOXA13P31271 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HOXA13P31271 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.38□□□□□ -1.39
HOXA13P31271 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA13P31271 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA13P31271 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 CASC19-255ENST00000641733 1385 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA13P31271 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
HOXA13P31271 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 AC005042.1-201ENST00000393397 800 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 MIR1178-201ENST00000408396 91 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 LDHAP2-201ENST00000437325 985 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 SPRYD7P1-201ENST00000443861 570 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 RN7SL51P-201ENST00000468230 285 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 EIF1P7-201ENST00000487533 337 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 BX510359.5-201ENST00000515651 304 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 RN7SKP5-201ENST00000517045 272 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.37□□□□□ -1.39
HOXA13P31271 NPM1P42-201ENST00000560329 862 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.37□□□□□ -1.39
HOXA13P31271 GMCL1P2-201ENST00000605230 823 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.37□□□□□ -1.39
HOXA13P31271 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.37□□□□□ -1.39
HOXA13P31271 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HOXA13P31271 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HOXA13P31271 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms