Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC8.11□□□□□ -1.11
RXRBP28702 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
RXRBP28702 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC8.11□□□□□ -1.11
RXRBP28702 KYNUP3-201ENST00000574386 1341 ntBASIC8.11□□□□□ -1.11
RXRBP28702 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 RNU4-24P-201ENST00000364565 139 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AK4P4-201ENST00000419465 646 ntBASIC8.11□□□□□ -1.11
RXRBP28702 SNRPFP2-201ENST00000440710 251 ntBASIC8.11□□□□□ -1.11
RXRBP28702 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC8.11□□□□□ -1.11
RXRBP28702 AL356981.1-201ENST00000454879 684 ntBASIC8.11□□□□□ -1.11
RXRBP28702 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.11□□□□□ -1.11
RXRBP28702 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 SUMO2P7-201ENST00000511179 285 ntBASIC8.11□□□□□ -1.11
RXRBP28702 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 NAT2-202ENST00000520116 716 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AC010376.1-201ENST00000522101 334 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AP003717.3-201ENST00000544832 1180 ntBASIC8.11□□□□□ -1.11
RXRBP28702 CKS1BP1-201ENST00000555221 240 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC8.11□□□□□ -1.11
RXRBP28702 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 AC103987.3-201ENST00000582071 292 ntBASIC8.11□□□□□ -1.11
RXRBP28702 NBR2-204ENST00000587322 63 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC010463.3-201ENST00000594077 500 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AL158042.1-201ENST00000605338 460 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC015849.6-201ENST00000605454 474 ntBASIC8.11□□□□□ -1.11
RXRBP28702 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 AL121895.2-201ENST00000619558 447 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AL669942.2-201ENST00000620352 697 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC073534.2-201ENST00000620377 381 ntBASIC8.11□□□□□ -1.11
RXRBP28702 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 AL357562.1-201ENST00000624911 609 ntBASIC8.11□□□□□ -1.11
RXRBP28702 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.11□□□□□ -1.11
RXRBP28702 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 NPIPB6-201ENST00000532254 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
RXRBP28702 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
RXRBP28702 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
RXRBP28702 UG0898H09-202ENST00000623646 7040 ntBASIC8.11□□□□□ -1.11
RXRBP28702 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
RXRBP28702 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RXRBP28702 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 RNU4-39P-201ENST00000362455 127 ntBASIC8.1□□□□□ -1.11
RXRBP28702 GAPDHP15-201ENST00000398586 975 ntBASIC8.1□□□□□ -1.11
RXRBP28702 BX664727.1-201ENST00000416024 466 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.1□□□□□ -1.11
RXRBP28702 RPS26P13-201ENST00000419030 330 ntBASIC8.1□□□□□ -1.11
RXRBP28702 TEX41-203ENST00000420472 765 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 AC013268.2-201ENST00000420753 337 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 MRPS33P4-201ENST00000434892 317 ntBASIC8.1□□□□□ -1.11
RXRBP28702 IGKV1OR10-1-201ENST00000442306 329 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC8.1□□□□□ -1.11
RXRBP28702 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 TPTE2P6-202ENST00000445572 1007 ntBASIC8.1□□□□□ -1.11
RXRBP28702 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC8.1□□□□□ -1.11
RXRBP28702 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 AC100832.1-201ENST00000471945 383 ntBASIC8.1□□□□□ -1.11
RXRBP28702 SYT14P1-201ENST00000481459 721 ntBASIC8.1□□□□□ -1.11
RXRBP28702 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 AP001207.2-201ENST00000519490 539 ntBASIC8.1□□□□□ -1.11
RXRBP28702 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
RXRBP28702 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
RXRBP28702 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC8.1□□□□□ -1.11
RXRBP28702 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.1□□□□□ -1.11
RXRBP28702 AL583856.2-201ENST00000606298 543 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AP002360.4-201ENST00000606980 481 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AC117490.2-201ENST00000610042 594 ntBASIC8.1□□□□□ -1.11
RXRBP28702 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC8.1□□□□□ -1.11
RXRBP28702 AL603839.4-201ENST00000624658 1005 ntBASIC8.1□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms