Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 NPM1P42-201ENST00000560329 862 ntBASIC5.33□□□□□ -1.56
COL5A1P20908 AC007346.2-201ENST00000564816 892 ntBASIC5.33□□□□□ -1.56
COL5A1P20908 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.33□□□□□ -1.56
COL5A1P20908 AC006115.2-201ENST00000596823 202 ntBASIC5.33□□□□□ -1.56
COL5A1P20908 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.33□□□□□ -1.56
COL5A1P20908 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
COL5A1P20908 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 AP004289.1-201ENST00000436307 2205 ntBASIC5.33□□□□□ -1.56
COL5A1P20908 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.33□□□□□ -1.56
COL5A1P20908 LINC02035-201ENST00000610128 5476 ntBASIC5.33□□□□□ -1.56
COL5A1P20908 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
COL5A1P20908 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC5.33□□□□□ -1.56
COL5A1P20908 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 RN7SKP104-201ENST00000362605 328 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL5A1P20908 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL5A1P20908 RNA5SP91-201ENST00000390902 119 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL5A1P20908 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 GAPDHP25-201ENST00000447061 1001 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 OSTCP1-201ENST00000455507 450 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 RN7SL459P-201ENST00000481078 302 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.32□□□□□ -1.56
COL5A1P20908 RN7SKP67-201ENST00000515905 235 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 HMGB1P40-201ENST00000525121 540 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AL133481.2-203ENST00000607558 139 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.32□□□□□ -1.56
COL5A1P20908 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.32□□□□□ -1.56
COL5A1P20908 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL5A1P20908 PWAR1-201ENST00000624188 2414 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
COL5A1P20908 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 SNORA17.1-201ENST00000362945 126 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 RNA5SP487-201ENST00000410186 122 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 BX679664.2-201ENST00000439282 283 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 CEACAMP9-201ENST00000442990 513 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.32□□□□□ -1.56
COL5A1P20908 PDCL3P4-201ENST00000489621 720 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.32□□□□□ -1.56
COL5A1P20908 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 PCNPP1-201ENST00000552501 511 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.32□□□□□ -1.56
COL5A1P20908 AP001357.1-201ENST00000586304 1053 ntBASIC5.32□□□□□ -1.56
COL5A1P20908 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.32□□□□□ -1.56
COL5A1P20908 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.32□□□□□ -1.56
COL5A1P20908 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.32□□□□□ -1.56
COL5A1P20908 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
COL5A1P20908 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
COL5A1P20908 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.31□□□□□ -1.56
COL5A1P20908 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL5A1P20908 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.31□□□□□ -1.56
COL5A1P20908 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL5A1P20908 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.31□□□□□ -1.56
COL5A1P20908 AL356317.1-201ENST00000396110 1436 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 AP002991.2-201ENST00000623807 2801 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 AC073365.1-203ENST00000641055 1992 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 HSPD1P7-201ENST00000447985 1686 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL5A1P20908 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
COL5A1P20908 AC018809.2-201ENST00000602436 3823 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL5A1P20908 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL5A1P20908 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL5A1P20908 RNA5SP326-201ENST00000363209 110 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 RNU1-43P-201ENST00000365052 165 ntBASIC5.31□□□□□ -1.56
COL5A1P20908 RNU4-2-201ENST00000365668 141 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms