Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AP005432.1-201ENST00000580891 3485 ntBASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
HLA-DPA1P20036 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC097063.1-201ENST00000426714 1797 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC023490.2-201ENST00000359859 470 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RNU6-249P-201ENST00000363016 102 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RNU6-729P-201ENST00000384399 107 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 OR7E101P-201ENST00000400428 513 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RN7SKP17-201ENST00000411242 351 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RPS3P2-201ENST00000421346 701 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 OR5W1P-201ENST00000423705 938 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 MGAT2P2-201ENST00000427194 797 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RPS23P2-201ENST00000463671 415 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC090568.1-201ENST00000509499 856 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AP000619.2-201ENST00000546014 969 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 ZNF322P1-201ENST00000568013 1209 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC243960.7-201ENST00000623532 707 ntBASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
HLA-DPA1P20036 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 OR2W4P-201ENST00000406496 926 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 RCC2P2-201ENST00000422174 918 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 IPPKP1-201ENST00000422501 768 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 FCF1P7-201ENST00000451185 558 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 RN7SL570P-201ENST00000484405 292 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 NENFP3-201ENST00000503735 313 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC114781.3-201ENST00000512083 142 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AC139365.2-201ENST00000517972 253 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.8□□□□□ -1.48
HLA-DPA1P20036 AP004609.2-201ENST00000532177 190 ntBASIC5.8□□□□□ -1.48
HLA-DPA1P20036 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms