Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAB40ALP0C0E4 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.52
RAB40ALP0C0E4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 RARSP1-201ENST00000542842 1418 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MIR365B-201ENST00000362317 111 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 SNORD1C-201ENST00000363315 78 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 RNA5SP394-201ENST00000364216 119 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL353625.1-202ENST00000366273 571 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL121977.1-201ENST00000401636 979 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 HMGB1P20-201ENST00000402555 677 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 OR3A2-201ENST00000408891 1076 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 RN7SKP29-201ENST00000410957 272 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MRPL53P1-201ENST00000414323 319 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MARK2P12-201ENST00000420129 585 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MTCO1P57-201ENST00000432182 261 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC009963.4-201ENST00000448535 339 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC074386.1-201ENST00000476560 767 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 RN7SL177P-201ENST00000476596 299 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC022215.1-201ENST00000481770 362 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC074087.1-201ENST00000512059 724 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 ATP5LP3-201ENST00000514223 304 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 SEC11B-201ENST00000518383 499 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL121839.1-201ENST00000556233 1185 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC007448.1-201ENST00000582714 234 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC027334.1-201ENST00000603257 310 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 FO393422.1-201ENST00000603908 708 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC104695.2-201ENST00000605056 775 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AC008833.1-201ENST00000611633 691 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL354696.1-201ENST00000614652 497 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 CR788268.1-201ENST00000603931 1809 ntBASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.52□□□□□ -1.53
RAB40ALP0C0E4 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 AC116158.1-201ENST00000560231 2129 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 AC112255.1-201ENST00000624070 2493 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 AL589826.1-201ENST00000340697 249 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 RN7SKP17-201ENST00000411242 351 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 TRIM60P17-201ENST00000415181 719 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 AC015977.1-201ENST00000418887 292 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 MTCO1P51-201ENST00000427672 1060 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 LDHAP2-201ENST00000437325 985 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 Z84478.1-201ENST00000438230 1219 ntBASIC5.51□□□□□ -1.53
RAB40ALP0C0E4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms