Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 AC010618.1-201ENST00000469924 477 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 RPL12P20-201ENST00000475538 479 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 RPS7P6-201ENST00000485777 579 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC3.35□□□□□ -1.87
PKHD1P08F94 TMCO1-208ENST00000612311 4468 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 PBRM1-201ENST00000296302 5145 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 PAPPA2-202ENST00000367662 9691 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 OR9G4-201ENST00000302957 984 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC079741.1-201ENST00000321498 212 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 MAST4-207ENST00000407621 559 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 CYP2AC1P-201ENST00000407830 1173 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC009237.10-201ENST00000414112 510 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC009237.5-201ENST00000414271 501 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.35□□□□□ -1.87
PKHD1P08F94 AL022319.1-201ENST00000458183 1167 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 CR383656.1-201ENST00000484916 377 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 GAPDHP56-201ENST00000506031 988 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AP000889.1-201ENST00000530968 660 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AP005119.2-201ENST00000579735 1105 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.35□□□□□ -1.87
PKHD1P08F94 CCDC58P3-201ENST00000590792 430 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 CYCSP1-201ENST00000604815 315 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 AC006338.2-201ENST00000616864 791 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 ALB-214ENST00000509063 1911 ntTSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 DEPDC5-202ENST00000382112 5363 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 NWD1-205ENST00000549814 6614 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 KARSP3-201ENST00000571212 1504 ntBASIC3.35□□□□□ -1.87
PKHD1P08F94 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
PKHD1P08F94 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PKHD1P08F94 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.35□□□□□ -1.87
PKHD1P08F94 OSTCP1-201ENST00000455507 450 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.34□□□□□ -1.87
PKHD1P08F94 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.34□□□□□ -1.87
PKHD1P08F94 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC3.34□□□□□ -1.87
PKHD1P08F94 AC013731.1-201ENST00000604340 883 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC3.34□□□□□ -1.87
PKHD1P08F94 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 OR1D2-202ENST00000641064 4882 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PKHD1P08F94 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC3.34□□□□□ -1.87
PKHD1P08F94 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 PRRC2C-204ENST00000426496 10175 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 SVIL-201ENST00000355867 7586 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
PKHD1P08F94 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PKHD1P08F94 OR4K15-201ENST00000305051 1216 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 NANOGP9-201ENST00000439890 892 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 FHP1-201ENST00000442741 703 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 AL162739.1-201ENST00000450606 307 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 RPL12P39-201ENST00000455456 496 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 AP000797.2-201ENST00000475768 606 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 AC009643.1-201ENST00000532030 391 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 AL049779.3-201ENST00000557141 606 ntBASIC3.34□□□□□ -1.87
PKHD1P08F94 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.34□□□□□ -1.87
PKHD1P08F94 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
PKHD1P08F94 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
PKHD1P08F94 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 MYH2-201ENST00000245503 6339 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
PKHD1P08F94 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
PKHD1P08F94 AL445189.1-201ENST00000405722 338 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 RSU1P3-201ENST00000412878 835 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 AL353626.3-201ENST00000413399 657 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 AL451136.1-201ENST00000435399 325 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 Z95152.1-201ENST00000453556 656 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 RPS17P5-201ENST00000498293 408 ntBASIC3.34□□□□□ -1.88
PKHD1P08F94 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms