Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL157777.1-201ENST00000468100 304 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 RPSAP37-201ENST00000470913 821 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 RPL5P12-201ENST00000477071 851 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 RN7SL193P-201ENST00000491708 276 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 SNORA76.2-201ENST00000517095 137 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC024405.1-201ENST00000532521 1042 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 NOP56P3-201ENST00000549457 385 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC090826.1-203ENST00000569235 490 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 MIR4776-2-201ENST00000580204 80 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 ZNF92P2-201ENST00000600543 1059 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC015849.2-201ENST00000605738 409 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AC005899.7-201ENST00000618199 588 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.44□□□□□ -1.54
NKX2-2O95096 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
NKX2-2O95096 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC107021.2-201ENST00000567714 2095 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 PARP4P2-201ENST00000446672 3326 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.44□□□□□ -1.54
NKX2-2O95096 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.44□□□□□ -1.54
NKX2-2O95096 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.44□□□□□ -1.54
NKX2-2O95096 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
NKX2-2O95096 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 CAP1P2-201ENST00000417455 1409 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 KARSP1-201ENST00000451871 1752 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 RN7SKP78-201ENST00000364711 318 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 RN7SKP187-201ENST00000365536 330 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AL391422.1-201ENST00000402155 436 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AL590399.2-201ENST00000427536 309 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC069154.1-201ENST00000432914 542 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC015983.1-201ENST00000441577 373 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC023141.8-201ENST00000442554 208 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 MTND2P39-201ENST00000457230 764 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AL122020.1-201ENST00000472287 459 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC093719.1-201ENST00000480427 441 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC006539.1-201ENST00000481419 501 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 WBP1LP3-201ENST00000523033 208 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC079905.1-201ENST00000549280 475 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC107958.1-201ENST00000556576 290 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC079148.1-201ENST00000565944 819 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 LINC00556-201ENST00000569603 412 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 SNORD39.2-201ENST00000579995 76 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.43□□□□□ -1.54
NKX2-2O95096 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AL133481.2-203ENST00000607558 139 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC024884.1-201ENST00000620583 399 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AL391262.2-201ENST00000622466 494 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 AC073593.1-201ENST00000624500 411 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.43□□□□□ -1.54
NKX2-2O95096 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.43□□□□□ -1.54
NKX2-2O95096 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
NKX2-2O95096 FBXL21-201ENST00000297158 1305 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 KYNUP3-201ENST00000574386 1341 ntBASIC5.43□□□□□ -1.54
NKX2-2O95096 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
NKX2-2O95096 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.43□□□□□ -1.54
NKX2-2O95096 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
NKX2-2O95096 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.42□□□□□ -1.54
NKX2-2O95096 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms